Microarray Probes on PGSC0003DMT400020647
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_29127_PI426222305 |
JHI_St_60k_v1 |
GTATTGGGCATCATCTATTGCTTCATAAAGTAATGAACTCCGGCGATTTTTGGTTGTTCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400020647
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400020647 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G16150.1 |
+1 |
0.0 |
547 |
270/325 (83%) |
N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein | chr3:5471794-5473033 FORWARD LENGTH=325 |
Transcript Sequence (1214 bp)
>PGSC0003DMT400020647 1214 pgsc_dm_v3.4
GCAAAACACAATTTTACAAGCATCAAAGCAATTAACAAAATAGAGAGAGAAAAGAGGGAG
AGCAAAAAAGGAGTTTATTGTAGAAATATGGGTGGTTGGGCTATAGCGGTGCACGGTGGC
GCTGGTGTGGACCCAAATCTCCCAGCTGAACGTCAGAAACAAGCTAAAGAACTCCTTACT
CGTTGCCTTAACATTGGAATCTCCGCTCTTCGCTCTTCTCTACCTGCCATTGATGTTGTT
GAACTCGTTGTGAGAGAACTGGAAAGTGATCCTCTATTCAATTCGGGTCGTGGATCTGCA
TTAACTGCAAATGGAACAGTGGAAATGGAGGCGAGCATTATGGACGGCGACGGTAGACGA
TGCGGCGCCGTTTCTGGTATCTCCACCGTGAAAAACCCAATCTCCCTCGCTCGCCTTATC
ATGGATAAATCCCCTCATTCCTATCTCGGTTTCTCCGGCGCTGAAGAATTCGCCAAACAA
CAGGGCGTGGAGATGGTAGACAATGAATATTTCATCACCGAGGACAATGTTGGAATGCTG
AAACTAGCCAAAGAGGCTAACACCATTTTGTTCGATTACAGAATTCCATTAACTGGATTG
GATTCCTGTGCGTCATCCGTTGAAAGCCCAATTCGCATGAACGGATTACCGATAAGTGTT
TACGCGCCGGAGACGGTGGGATGTGTGGTGGTAGACGGCCAAGGTAGGTGCGCCGCCGCC
ACATCCACCGGTGGTTTAATGAACAAAATGACCGGTCGTATCGGTGACTCACCGCTGATT
GGTGCTGGGACCTACGCAGGTGAGCTTTGTGGGGTGTCATGTACAGGGGAAGGAGAAGCT
ATCATACGTGGAACCCTAGCACGTGACGTGGCAGCAGTTATGGAATATAAGGAATTGGGC
CTTCAAGAAGCAGTGGACTTTGTGATTAAGAAGAGATTGGATAAAGGGTTTGCTGGGCTT
ATTGCTGTGTCTAATAAAGGGGAAGTGGCTTATGGGTTTAATTGTAATGGAATGTTTAGA
GGATGTGCTACTGAAGATGGATTTATGGATGTTGGTATTTGGTAATAGAGAGATAGAGTT
TATTAGGATGTTATTTGCTTGATAAATAATTATGTTTGGTAATTACTAGTACCAATGTTT
TTAAGTTTAATTGTGTATTGGGCATCATCTATTGCTTCATAAAGTAATGAACTCCGGCGA
TTTTTGGTTGTTCA
