Microarray Probes on PGSC0003DMT400020606
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_29055_PI426222305 |
JHI_St_60k_v1 |
GGCCTTTCTAGGGTTTTAGAATATGGTCAAAGTATGTCTATATGGTTTGATCATCATGTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400020606
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400020606 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G21550.1 |
+1 |
1e-05 |
44 |
20/59 (34%) |
Calcium-binding EF-hand family protein | chr1:7553317-7553784 REVERSE LENGTH=155 |
Transcript Sequence (549 bp)
>PGSC0003DMT400020606 549 pgsc_dm_v3.4
TCTACATACATCCTCTTATAAATACTTTTTGCATCTTCTTTTCTCTTTAGCACAAAAACA
AAATATATATACACGTATACATCTAAATTAAATATGTTGAACTTTATTAGGCCTAGTAGG
AACAACAACATAAAGTGTGCCTGCAGTCATGTACATTTGTCCGATGAACAATTAACCAAA
GTTATAAAGAAATATGATTCCAACGGCAACAATTACCTCAACAAAGAAGATCTGAAGGAG
TTGTTCCGGCAGCTAGGCTCCAACGCCCCGAGATGGCGAGCTGCTCGAGCTATTCACCAT
GCTGATAAGAATGGCGATGGACGTATTGATATGACCGTGGAGTTAGATCAACTTGTTAAG
TATGCAAGAAAACATGGGTGTACACTAGCTTCCGCTTGTTGTAAGAAGTAAATCAATAAC
TATGTACGTGAAAAAATTGCGTTTTTTTTTTTGGCCTTTCTAGGGTTTTAGAATATGGTC
AAAGTATGTCTATATGGTTTGATCATCATGTTTGTACTTTCTCTTTATGTAAGTTTTGCT
ATATAGGCC
