Microarray Probes on PGSC0003DMT400020581
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28998_PI426222305 |
JHI_St_60k_v1 |
GCTGTATCTTACATGCCTTGTACCATCGTTATTTGAGTGAACTCTTAAATAAGTTGTAAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400020581
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400020581 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G42900.1 |
+2 |
1e-27 |
110 |
74/194 (38%) |
cold regulated gene 27 | chr5:17198366-17199712 REVERSE LENGTH=246 |
Transcript Sequence (1210 bp)
>PGSC0003DMT400020581 1210 pgsc_dm_v3.4
TGAGCCTCTATTTCTACCAAAAGTTCCTCCCTTTTCTTCCTCTCAATTTCATTCGCTTCT
CACAATATAAATTCCCAATTTTTTCATATAATAAATTATACTCTAACCTATAGTTTTTTT
TGTTCAAGATAAAATAATGGAAACTCTATCGGATTCGAAAGGAAAAACTTCTACTAAGAA
TTTGGGTCATAAGATTGAAGAATTTTTGACTATGGAGGATTCTCGACCGAAGAGCATGGA
ATGGACTGACAAGAAGCATAGTTTGTATCTCAAGTCTATGGAAGCATCATTTGTCGACCA
CTTATATGGCTCCTTAGATGTAGTTGGTCGCCATTCCCAAAATGATGGCTTGTCAAGGCA
TAAATCATCAAGGCAAAGGCATGCCAATCCTTCAGGCCAGTATAAGGTGTTTCAAGATGG
TTGTTGGACCAAAATTGACTTCAAGAAAGACGAGCCTCAGTTAAATAAAACAAATGAATC
CGCTGCTGTATTGGCAAGCCCTTGGATTAAGCATTACAAATCTACAGGCAGACATCAAAT
GAGAGTAAATTCAGATCTACAGGGGAACACTAACTCAGTGAAACAGAACCAATCTCCCGT
ATCTGACTTCGGTTTGTGCCATAAAGATTATGTTACAGAGGTGATGGATCAAAACTTTAT
CGATGAAGATCTTGAAGGAGGACAGTCTAGCAGCAGGGAGCATTGCACAAAACGGACAAA
AATTCAGTTAGGTGCCGGTACAAGCAGTGATCAAGTAGTTCCATTTTGCACATCCTCAAT
GACTGATAATCTTAAGGATCTTCTCGAGTCGACGGAGTAAGTCTTTGGCTCTCAGCGATG
ACTATGATGACACTAACCTCTTTAACCAAGAACGACGAATGGAATGTAAAAACAGCAGGT
GGGAACACGTCGCGTTTCAAACTATTGCTATAGGTTGATCAAGATTTTGCTACAGTTTTG
CCCGGAACTAGTCATGGTTTTAATCTCTTTATTTATCTGTATGTTGGAAATTCGAGTAGC
CATCGAACCTCTAATCCTTGTACAGATTTTGGGAAAATGTTGTCAAAAAATGCTTGCTGT
ATCTTACATGCCTTGTACCATCGTTATTTGAGTGAACTCTTAAATAAGTTGTAACTAAAA
ATTGTCAATTTTTTCGAGTGTTAGCCATCAAAAATTCGGTTGGAAATATACTATCATATC
ATGAATTGAC
