Microarray Probes on PGSC0003DMT400020536
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28986_PI426222305 |
JHI_St_60k_v1 |
CCTTCAGGCTTGCTTTGAACATAACTGTTATTTTACCAGTGAAAGGACATGATTTTATTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400020536
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400020536 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G02630.1 |
+3 |
0.0 |
615 |
336/489 (69%) |
Protein kinase superfamily protein | chr4:1151683-1153161 FORWARD LENGTH=492 |
Transcript Sequence (2108 bp)
>PGSC0003DMT400020536 2108 pgsc_dm_v3.4
ATCAAGAATCCAGTGGGGGCAATTTTCTCCATTTCTACCAGTCCTATCATTACAGCTCCC
CCCCACCCACCCCCAATCTCCATGGTCCCAAAACTCCCTCTCAGCTTAGCTCCAAAGATG
ACTTGTACTGTAACAAGCCACTGTCTCTACCATCAACACTAGAGTCCATAGTCCCCACCA
TAGTGCCACATGCATTATCCCATTACCATATAATACTTTGTCTTGCTCCTCCAACGGTTC
TTTGTTAATCAACGCCCAATTCTTCTTCCCGGAGCTGGAGGAGAAGAAGAAGAGGGAATT
ATACTATGTCGGGGTTTCTGACTGATGAACTTTCCAAAAGAACTTCAATTTTTGGTTTAC
GTTTATGGGTTGTTTTGGGTATTTGTGTAGGAGCTGCAATTGTGCTTGTTCTGTTTCTTA
TCTCACTATGGTTCACTTCCAAACGTAGCACTAGTAAAATGACCCTTTCAGTTTCAGCTA
AGAAAAACCCCAATATCCCTAAAGTATCCAAGGAAATTCAGGAAATCCGAATCGACCCAA
TTCGGACTCTGCCGGAAAACCCGAAATTACTACCTGCTCCGATACCGGAACCTGATTCTT
TCGAGGAGAAAACCCAGAATTCCGATGATTATCAGAGAACACTCATTGAGATCGGAAAGG
GTGAGAAGATTGCCCATCCGGGTCGGGTTGGGCAAGGTGGCGGGTCTAGTCATGGTAGTG
AGGAAGCTCGGTCTAATGAGCAGGCTATCATTGCTGTGCCGGAGGTTTCGTATTTGGGGT
GGGGTCATTGGTATACACTGAGAGAGCTTGAAATTTCAACAAATTATTTTGCTGAGGAAA
ATGTGATTGGTGAAGGTGGGTATGGAATTGTTTACCGTGGAGTTATGGAAGATAACAGTA
AAGTTGCTGTTAAGAATTTGCTCAATAACAGGGGTCAAGCAGAGAGGGAGTTTAAGGTTG
AAGTTGAAGCAATTGGTCGGGTTCGGCACAAGAATTTGGTGAGGTTACTTGGTTACTGTG
CTGAGGGTGCTCACAGGATGCTTGTGTATGAGTATGTGGACAATGGGAACTTGGAACAGT
GGCTCCATGGAGATGTAGGGCCTTGCAGTCCTCTTACATGGGAAATTAGAATGGATATCA
TTCTTGGAACAGCTAAAGGGTTAACCTATCTTCATGAGGGCCTTGAACCCAAGGTTGTTC
ACCGTGACATCAAATCAAGCAATATTTTGCTTGATAAGCAGTGGAGTCCGAAAGTGTCAG
ACTTTGGCTTGGCAAAGCTTTTGGGTGCTGAGAAGAGCTACATTACTACTCGGGTTATGG
GAACATTCGGTTACGTTGCTCCGGAATATGCTAGCACTGGCATGTTGAATGAGAGAAGTG
ATGTGTATAGTTTTGGAATTCTTATTATGGAAATCATTTCTGGAAGGAATCCGGTGGATT
ACAGCCGTCCTCCTGGAGAGGTAACTCTGGTTGATTGGCTTAAAATAATGGTTTCAAACC
GGAATGCCGAGGGCGTTGTGGATCCCAAGATACCTGAGAAGCCTTCTTCAAGAGCCCTGA
AACGTGTTCTTTTGGTAGCATTACGCTGTGTTGACCCCAATGCTCAGAAGAGGCCAAAAA
TGGGACAAGTAATACACATGCTTGAAGCTGATGACTTTCCCTTTCGTGATGAGCGACGGG
CTTCAAGGGAGCATGGTGGTCGTTTATATCGTGATGGTGCTAAAGAGAGGTTAATGGACA
AGCGTGTAATTGAATCAGGTGATAGCAGTGGATATGAAAGTAGTGTGCAAACCAACTGGT
CTTTGGTCAAGAAACAAGAAACCGATGATGAGCATTAGCAGCACCAACAACAAGGTCAAT
TCCAACCCCGTTGTTTCGTCTGTCATTCATTTGGAGCTAGCACATGTAAATATCATTCAC
TTAACTTCTGCATTTTCAGTTAATTCAGCAGTCTTGATAGGTTTTGTAGCATAGCCCTTG
TTATTAGTGTATGTAATTGCCTTCAGGCTTGCTTTGAACATAACTGTTATTTTACCAGTG
AAAGGACATGATTTTATTGTATTGCATTTACCACAAACGAGTTTAACTTTTGTGCACTGA
CAATATCC
