Microarray Probes on PGSC0003DMT400020044
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_15530_PI426222305 |
JHI_St_60k_v1 |
GTTTTCCACTGCTGTGTTGCTGAAAATGGTTGTAAAAAGGATTGAAGATTGATCTGAATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400020044
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400020044 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G19570.1 |
+1 |
2e-90 |
279 |
175/321 (55%) |
cytidine deaminase 1 | chr2:8470598-8471503 REVERSE LENGTH=301 |
Transcript Sequence (1232 bp)
>PGSC0003DMT400020044 1232 pgsc_dm_v3.4
TTACTTCCCCCCTCCCCTCCTCATTTCAAGGAAGTGTGCCAAACATTTAGATCCTTCTCA
CCAAAAAAAAAAAAAAAGAAGGGAAAATAGAGAAAAAGGAAAGGATTTACATTAGAGAAA
GGGATAATCATGGATCAACTAAAATTTGTGGTGGAAGCCTCTGAGGCTGAGTCCATTACC
CACAAACTTGGCCTACCTTCTGTCCACCACCTCCTCCCTGTCTTGGTTCAACCCGCACAG
ACCCTTGCCCGCCCACCCATCTCCAACTACCACGTCGCCGCCGTTGGCCTCGGCTCCGAC
GGCCGTGTATTCCTCGGTGTTAACCTTGAATTTCCTGGCCTACCCCTTCATCACTCTGTT
CACGCCGAGCAGTTTCTCATCACTAACCTTGCTGTCCACCGCTGTCCCCGCCTCGTTGCA
TTCGCTGTCTCTGCCGCCCCCTGTGGCCACTGCCGACAGTTTCTTCAAGAACTCCGAAAC
CCTTCCGATCTCCAAATCCACATCACATCTCAACACCAAAACAATCCCAATGTCACATTC
GAACCTTTGCGTGAAATTCTCCCAAACCCATTTGGTCCATTCGATCTCCTTGATGACGAA
ACTCCTTTACTCCTCGAGCGACATAACAACGGTTTAATCCTGTCGTATGAGATTAATCAC
GATGGAGATCTATGCAATGGGTTCTCAGATGACGATTTGAAATCGGGAAATCTGAGTAAT
GGGTTTTATAAATTGACAGAAACAGAGAGTACCCTTTTAAGGATTGCAGCTTTGGAAGGT
GCTAACGATTCACACGCACCTTACAGTGGGTGTCCATCAGGGGTAGCAATTATGGATTAT
GAAGGGAAGATTTATAGAGGTTCTTATGTGGAATCTGCTGCTTATAATCCAAGTTTAGGG
CCGGTGCAGGCGGCATTGGTGGCTTTTGTGGCTGAAGGAGGTGGTGGGTATGAACGAATT
GTGGCGGCGGCTTTGGTGGAGAAGGAAGGCGCAAAGGTAAGGCAAGAGGACACTGCTAGG
ATCTTTCTGAAATTGGTTTCTCCTAAATGTGACTTGAAGGTTTTCCACTGCTGTGTTGCT
GAAAATGGTTGTAAAAAGGATTGAAGATTGATCTGAATTTAACCAATATTTGTTCATTCT
GCAATTGCAAGTTGTCTTGTAAAAATATCCACTTTGATTATAATCAATGAAATGAATAAA
ACATATTAATCCACCATCCTATTAGAAATCAT
