Microarray Probes on PGSC0003DMT400019824
Probe ID | Chip | Probe Sequence |
---|
CUST_51132_PI426222305 |
JHI_St_60k_v1 |
CTCCACCTCAAAGGTATACTAGTACACCTCATTTTTATTCATTTGGTTTATGGATAGAGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400019824
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400019824 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G23910.1 |
+3 |
4e-79 |
247 |
131/266 (49%) |
NAD(P)-binding Rossmann-fold superfamily protein | chr2:10177902-10179789 FORWARD LENGTH=304 |
Transcript Sequence (994 bp)
>PGSC0003DMT400019824 994 pgsc_dm_v3.4
ATTAAACTTAGTTCTCTCTCTTATATAGAAAAAAAAGTTGTCTATTGACTTGAAAATAGC
AATCAATTTATAATCTCAAAATGGCTCCAGCTTCTTACAATTGTATTTTCAATACAATAT
GTGTAATGGACGCTTCCACTCGATTAGGCACAAAGCTAGTAAAACGTCTTCTCAAGAGAG
GTTACACTGTTCATGCAGCTATTCAAAATCATGGCGAGTCGTCGTCGTTGAAGAGGATTG
AATGTGAAGAGAAGAAATTGAAGATATTTGAGTCGGACCCTTTTGATTATCATAGTATTC
TTGATGCTTTGAAGGGTTGTTCTGGTTTGTTCTACTCATTTGAACCTCCAGCAGATTATC
CTACTTACGATGAAGAAATGGGAGAAGTGGAGGTGAGGGCAGCACATAATGTATTGGAAG
CATGCGCACAAACAGACACAATAGAAAAAGTTGTTTTTACTTCCTCAGCAACTACAATTA
TTTGGGGACATGATAAAGATTCTGCACCATCTATTGATGAAAGACATTGGACTGACATCA
ACTTTTGTCGTAAATTCAAGTTGTGGCATGCTATGTCAAAAACACTAGCAGAGAAGACAG
CTTGGGCATTGGCAATGGATAGAGGAATAAACATGGTGACTATTAACTCAGGACTGTTAA
TGGGTCCTGAATTAACCATTACTAATCCTTATCTCAAAGGGGCAGCTGAGATGTATGAAG
ATGGTGTGTTTGTGACTGTTGATCTTGATTTCTTGGTGGATGCCCACATTTGTGTTTATG
AAGATATAGCATCATATGGTAGATATTTGTGCTTCAATCACATCATTAACCAAAAACAAG
ATGCTCTTAACCTTGTCCAAATGTTGTCCCCTTTGCCTTCTCCACCTCAAAGGTATACTA
GTACACCTCATTTTTATTCATTTGGTTTATGGATAGAGTTTAACTAGTTACATTCATCAA
CGATGTAAAAGAACTTTTATACTATCAAATCACG