Microarray Probes on PGSC0003DMT400019823
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_51136_PI426222305 |
JHI_St_60k_v1 |
GAGGACACATAGATGGCTAAATGCAAGGCATGTAATCATGTTTATGTACAAAAGTCAATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400019823
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400019823 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G23910.1 |
+3 |
3e-78 |
248 |
138/290 (48%) |
NAD(P)-binding Rossmann-fold superfamily protein | chr2:10177902-10179789 FORWARD LENGTH=304 |
Transcript Sequence (1302 bp)
>PGSC0003DMT400019823 1302 pgsc_dm_v3.4
ATTAAACTTAGTTCTCTCTCTTATATAGAAAAAAAAGTTGTCTATTGACTTGAAAATAGC
AATCAATTTATAATCTCAAAATGGCTCCAGCTTCTTACAATTGTATTTTCAATACAATAT
GTGTAATGGACGCTTCCACTCGATTAGGCACAAAGCTAGTAAAACGTCTTCTCAAGAGAG
GTTACACTGTTCATGCAGCTATTCAAAATCATGGCGAGTCGTCGTCGTTGAAGAGGATTG
AATGTGAAGAGAAGAAATTGAAGATATTTGAGTCGGACCCTTTTGATTATCATAGTATTC
TTGATGCTTTGAAGGGTTGTTCTGGTTTGTTCTACTCATTTGAACCTCCAGCAGATTATC
CTACTTACGATGAAGAAATGGGAGAAGTGGAGGTGAGGGCAGCACATAATGTATTGGAAG
CATGCGCACAAACAGACACAATAGAAAAAGTTGTTTTTACTTCCTCAGCAACTACAATTA
TTTGGGGACATGATAAAGATTCTGCACCATCTATTGATGAAAGACATTGGACTGACATCA
ACTTTTGTCGTAAATTCAAGTTGTGGCATGCTATGTCAAAAACACTAGCAGAGAAGACAG
CTTGGGCATTGGCAATGGATAGAGGAATAAACATGGTGACTATTAACTCAGGACTGTTAA
TGGGTCCTGAATTAACCATTACTAATCCTTATCTCAAAGGGGCAGCTGAGATGTATGAAG
ATGGTGTGTTTGTGACTGTTGATCTTGATTTCTTGGTGGATGCCCACATTTGTGTTTATG
AAGATATAGCATCATATGGTAGATATTTGTGCTTCAATCACATCATTAACCAAAAACAAG
ATGCTCTTAACCTTGTCCAAATGTTGTCCCCTTTGCCTTCTCCACCTCAAAGTTTGGAGG
AAGACACAACGATAATACAACAAAGGATCAGCAACAAGAAATTAAACAAGCTTATGGTTG
ACTTTAGAGGATGCCAGCCTCAGATTATGGACCAAAATGCAAATCAAGACATTTGCTTAT
CATGAAAAAACTACATATTAAATCAAAGGGATCTGAATCTCTTATCAAAGTGTACAAATA
ATGTCCAAGTGCAAATCAAATGCGATAAAATTACTTTTCCCAAACCCCACTTCCCAAGTA
GGCAAGTTACTAAAAAAGTTGCTCCTAAAAAGAAAGAAAAAGAGAGGACACATAGATGGC
TAAATGCAAGGCATGTAATCATGTTTATGTACAAAAGTCAATAAATTAAAAAACACCATG
TGAATTATGAGTTGTTTTTTATGTGCAAAAATGTGATGGTTA
