Microarray Probes on PGSC0003DMT400019426
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_47888_PI426222305 |
JHI_St_60k_v1 |
GAGGCATTTCATTATCCTGGACAAGTATCTTTGTACTACCAAGAGTTCCCAATAACCTTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400019426
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400019426 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G45650.1 |
+2 |
6e-180 |
525 |
290/546 (53%) |
nitrate excretion transporter1 | chr3:16759253-16761266 FORWARD LENGTH=558 |
Transcript Sequence (1811 bp)
>PGSC0003DMT400019426 1811 pgsc_dm_v3.4
CCCTTTGTGTTTTTCAACCATGGAAGCTCCAATATCAGAGGCACAATTACCTAGAAGAAC
CGGAGGCTGGATCACCTTCCCCTTCATCATAGCGAGCTCAGTAGGGTTGACCTTAGCATT
TGGAGGTTGGACAAACAATCTTATTGTGTATCTGATTAAGGAATTTGATGTGGAGAGTAT
TGATGCTGCTCAAATATCAAATTTGGTTAATGGTGCTGGAAGCTTAATTCCTGTTGTTGC
TGCAATTATTGCCGACTCATTTCTTGGTTGCTTCTCTACCATTTGGATTTCATCCATCAT
CTCATTATTGGGCACTATCCTTTTAGCTTTAACAGCTACAGTTGATTCTTTAAGGCCTAA
ACCGTGTGAAGTTGATTCAACCTCATGTACCCCTAAACCGAAAGTTCAATATGTAGTTCT
CTATGCAGCAATAGTTCTGGCTACTCTGGGTAGTGGTGGTACCCGATCAACCCTTTCGAC
GATTGGAGCGGATCAACTAGCTGATAAACCAAAAGATCAAGGAATTTTCTTCAATTGGTT
CTTCTTCTTTTGGTATTCTGCTTCTGTAGTATCGTCCACAGCTATTGTCTATGTTGAAGA
TAACGTGAGTTGGAAAGCTGGATTTTTCATTTGTGCTGCGTCCAATATTGTTGCTTTACT
CATTTTCCTAATGGGAAGTAGATTTTACACTAAATTTAAGCCAGAAGGGAGTCCATTCAC
CAGTTTGGCTCGTGTTGTTGTTGCTAGTATTACCAAAAGACAAGTTCCACTCCCATCTAC
TGCTCAGGATTTCTTCCAGGGATGTAACGTAGCACCCAAATCACTAGCTGTTGTACCTTC
CAACACCTTCAGGTTTTTGAATCGTGCTGCTATTATAAGTGAAGGTGACGTAAAATCAGA
TGGTTCAACAAGTAATCGATGGAGACTTTGTTCAGTACAACAAGTAGAAGATTTCAAAAC
CTTAATTAAAATCTTACCACTTTGGTCAAGTAGTTTTTTTCTTGGCACCACAATTGGGGT
GCAATTAAGTTTTTCAGTCCTTCAAGCCTTAGCAATGGACCGCCACATAGGACCCAATTT
CCAAATCCCAGCTGGATCCGTACTCGTTTTTGTCCTCATATCTACTGCTCTATTCCTCGC
CCTGTTCGATAGAATTGTTTTACCTACGTGGAAGAATTTGACAGGCAAATCACTTACGCC
TCTCCAGAGAATTGGGATTGGACACGTGCTCAATTTTGTGAGCATGGGTGTATCAGCCTT
AGTCGAGTCAAAGAGACTAAATGTAGCAAAATCAAATGAAGGTTCCAATATTGTGGCAAT
GTCAGTTTTATGGCTTGTGCCACAATTAGCACTTAATGGTATCGCGGAGGCATTTCATTA
TCCTGGACAAGTATCTTTGTACTACCAAGAGTTCCCAATAACCTTAAAGAACATGGCGAC
GGCGATGAATTCTATGCTTATTGGTATAGCATTTTATTTGACTACCGCTCTAATTGATGT
TGTTAGAAGGACAACTACATGGTTACCAGGTAACATAAATAATGGAAGATTGGATAATGT
GTACTGGATATTGGTTGTAGGGGGAGTAGTGAACTTTGGTTACTATGTAACATGTGCTTG
GTATTACAAGTATCAAAACCTCAACGAAGTGGATCATAATGAGACTCCTTCTGATGAGTG
ATTTGAGGATGAGATCAATTTTAATATCCTCAGACTTGTGAGTGAGCAATAATTAATTTA
TCATCAATCTGCAATTACTGAAAAAACATGTTGTAATGTCAACTTCAGACAAAGATATAT
GAAGTTTTGAA
