Microarray Probes on PGSC0003DMT400019314
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_47813_PI426222305 |
JHI_St_60k_v1 |
GGAGGTTTGTAAATTTTCCCAGAGCAGGCAACATGTGTATAGTAATTCTTTTATATCTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400019314
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400019314 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G68710.1 |
+1 |
0.0 |
1785 |
882/1186 (74%) |
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | chr1:25793498-25797975 REVERSE LENGTH=1200 |
Transcript Sequence (3943 bp)
>PGSC0003DMT400019314 3943 pgsc_dm_v3.4
GGAGTTTGCAAAAAAATGAAGACAGGTAGAAGGAGGAAATTACATTTTAGCAAGATTTAC
ACATTTAAATGTGGGAGAGATTCATTTTTAGGTGATATTGATCATTCACAAATTGGAGGT
CCAGGATATTCAAGAGTTGTTTATTGTAATGAACCAAGTAGTTTTGAGGCTGTAATTAGA
GATTATGTTGGAAATTATGTAAGTACTACAAAGTATAGTTCTGCAACTTTCTTGCCAAAG
TCCTTATTTGAGCAGTTTAGAAGAGTGGCAAACTTTTACTTTCTTGTCATTGCTATATTG
TCCTTCACACCACTTACTCCTTATTCTCCTACCACTGCTGTTATTCCTCTTGTTATTGTC
ATTGGAGTCACTATGTTGAAAGAAGGTATTGAGGATTGGCAGAGAAAACAACAGGATATT
GAGATGAATAATAGGAAGGTTAAAGTACATCAAGAAAATGGAGTTTTTAACCAAACAGAA
TGGAAAAACTTGAGAGTTGGTGACATTGTTAAGGTGGAGAAGGATGAGTTCTTCCCGGCA
GACTTACTGTTGCTTTCATCTAGTTATGAAGATGCAGTGTGCTATGTTGAAACCATGAAT
CTTGATGGGGAGACTAATTTGAAGCTTAAGCAGGCATTGGAGGTGACTTCATCGTTGCAC
GAAGATTCCCATCTCAATGACTTTAAGGCTTTTGTTAGATGTGAAGATCCTAATGCTAAT
TTATATGCTTTTGTTGGAACTATGGAATATGGAGAAAAGCAGAATCATCTTTCTCCCCAG
CAATTACTTCTCAGAGACTCTAAATTGCGGAACACAGATTACATATATGGGGCTGTTATC
TTTACTGGTCACGATACAAAGGTCATGCAGAATGCTACTGATCCACCTTCGAAAAGAAGC
AATGTTGAGAGGAGAATGGATAAGATCATTTACTTCTTATTTGGACTTTTGGTCACTATG
TCCTTTGTTGGATCAGTCTGCTTTGGATTTCTGACTAAAGAGGACTTATATGATGGACAT
AAGAGGTGGTATCTACGGCCTGATGAATCGAACATATATTATGATCCCAATAGAGCTTTT
GCTGCTTCCGTATACCATTTTCTGACAGCCGTGATGTTGTATAGCTACTTGATTCCGATA
TCCTTATATGTGTCAATAGAGATTGTTAAAGTTCTTCAGGGTATGTTCATTAATCAGGAC
ATTCATATGTATCATGAAGAAACGGATAGACCAGCACATGCCCGCACCTCAAATTTAAAT
GAGGAACTTGGTCAGGTTGACACAATACTTTCAGACAAAACTGGTACCTTAACTTGTAAC
TCAATGGAGTTTGTCAAGTGTTCAGTAGCTGGAACAGCTTATGGGCGTGGTATTACAGAT
GTCGAGAAGGCTATGGCTAAAAGAAATGGTTCTCCACTGATTGAGGATTCTACTGTTACT
CCAAAGAAGTCCTCAATAAAAGGCTTCAACTTTAAAGACGAGCGAATCATGAATGGGAGT
TGGGTGCATGAGCCTCATTTAGATGTTATACAGAAGTTTTTCCGTTTATTAGCTGTCTGT
CATACAGTCATACCAGAAGTGGATGAAGAAACAAGTAAGATATCATATGAAGCTGAATCT
CCAGACGAGGCGGCCTTTGTAGTTGCAGCTAAAGAAATTGGCTTTGAATTAGTTAAAAGG
ACACAAACAAGTGTGTCAGTGCATGAGTTGGATCTGGTATCTGGCAAGAAAGTCGAGAGG
TTATATACAGTTTTGAATGTGTTGGAGTTTAATAGTGCAAGAAAAAGGATGTCTGTAATA
GTAAAAGATGAGGAGGGAAAGATACTGCTACTCTGCAAAGGTGCTGATAGTGTCATGTTT
GATAGGCTCGCGAAAAGTGGAAGAGAATTTGAAGAGATAACAAGGGAACATGTAAATGAG
TATGCTGATGCAGGCTTGAGGACCTTGATACTGGCTTATCGAGAAATCACCAAGGACGAA
TACCAAGTGTTCAATGAGCAGTTTTTAGAGGCCAAGAATTCAGTCAGTGCAGACCGTGAT
GCGTTGATTGATGAAGCAACTAAAAAGATTGAAAAGGAGTTGATTCTACTTGGCGCCACT
GCTGTTGAAGACAAACTCCAACAAGGGGTTCCTGAATGCATTGACAAACTTGCACAAGCT
GGTATCAAGATATGGGTTTTGACCGGGGATAAGATGGAAACAGCCATTAATATCGGTTAT
GCCTGTAGTTTGCTTAGACAAGGAATGAAGCAAATTATCATTAACTTGGAAACGCCTGAT
ATTATAGCAACTGAGAAAGGAGGAGACAAAGATGCTATTGCCAAGACATCAAAGGAAAGT
GTTGTACGGCAAATTATAGAAGGGAAAGCTTTACTTACGGGTTCAAAGGCAGAGGCATTT
GCTTTGATCATTGATGGGAAATCACTTACCTATGCTCTAGCAGATGACACAAAAAGATTG
CTTTTAGACCTTGCGATTGGATGTGCCTCTGTTATATGCTGCCGTTCATCACCTAAACAA
AAGGCATTGGTAACAAGACTTGTTAAATTTGGGACTGGAAAGACAACTTTAGCCATTGGA
GATGGAGCTAATGATGTAGGAATGCTTCAAGAAGCTGATATTGGAATTGGAATCAGTGGC
GTTGAAGGAATGCAGGCTGTTATGTCAAGTGATGTTGCAATTGCTCAGTTCCGATTCTTG
GAACGTTTGCTTTTAGTGCATGGTCATTGGTGTTACAGAAGGATCTCTTCAATGATATGC
TACTTTTTCTACAAAAACGTTGCATTTGGCTTTACTCTCTTCTTATACGAGACATATACA
TCATTTTCTGCACAACTTGCATATAACGATTGGTTTCTGTCGCTTTACAATGTCTTCTTC
ACATCATTACCAGTGATTGCTTTGGGTGTTTTTGATCAAGATGTATCTGCTCGATATTGT
CTTAAGTTTCCTATACTGTATCAAGAAGGTATACAAAACGCCCTTTTCAGCTGGCGTCGT
ATAATTGGCTGGATATTGAATGGTGTCTGCAGTGCAGCTATTATCTTCTTCATCTGCATA
ACAGCGCTAGATCCTCAGGCCTTCAATAAAGATGGTAAAACTGGTGACTACAGTATCGTG
GGAGCAACAATGTACACATGTGTTGTTTGGGTTGTTAACTGTCAGATGGCTCTAGCTGTT
AGTTATTTCACCTTAATCCAACACATCTTCATCTGGGGTGGAATAGCTCTCTGGTACATC
TTCCTTCTAATATACGGAGCCATGCCTACGACACTTTCCACCAACGCATACCAAGTCTTC
GTGGAAGCTCTTGTTCCCTCCCCGTTATACTGGTTAGTCACACTGTTAGTAGTTGTTTCA
GCTCTAGCCCCTTACTTTACATATGAAGCAATTCAGTTCCGGTTCTTCCCAATGTACCAT
GGGATGATTCAATGGATAAGGTATGAGGGAAACTCGAATGATCCTGAGTTCTGCAACGAC
GTGAGGCAGAGGTCAATAAAACTAACAACTGTAGGTTTCACTGCTCGTTTGATAGCAAGA
TCTAATTCTAGTCTAAAACGACATGAATGGTATTCACGGATGATCTTCGATTAGATCTCT
CTCAGCAGGACCAGACTTCAGAACTACAGAGAGCCACAGTTTTTCGAACTGGAATCCCTC
AGCTAAGAGATGCAACAGAAGCAACATTCTGCCATGACATGTCTTAATCAGACGAAAAAA
TTGCCCTGGAGGTTTGTAAATTTTCCCAGAGCAGGCAACATGTGTATAGTAATTCTTTTA
TATCTTGTAGAATTATGAGATCTTCTTTGTTAAATACAAGAAGCAGAGTAGATAGAATAG
GTAAAGAGATAGCAATAATCTTGTGTAAATTTTCTAGCAATTGCACTAAAGAATGATCAT
TTCTATTTGAAATAATGTACAGAAATTTCTCTTTGAGTGTTAA
