Microarray Probes on PGSC0003DMT400018339
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_17137_PI426222305 |
JHI_St_60k_v1 |
CCATGGTGTCCATCTAGGGAAGAGTAACAATTCTTTTTCCTACTCAAAATATGAGACGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400018339
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400018339 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G27820.1 |
+1 |
0.0 |
586 |
306/379 (81%) |
prephenate dehydratase 1 | chr2:11856808-11858082 FORWARD LENGTH=424 |
Transcript Sequence (1550 bp)
>PGSC0003DMT400018339 1550 pgsc_dm_v3.4
TTCTCAGCTTGCACGTTCCCTTCCTAAAAGAGAACTACAAGCTTCAATCTTTACTCTTTC
AATTCATTTCGTTACTCAAATAATATAGATTTATTTTCAATTTAACGAGATTAAATCAAA
ATGCATACCATTACTCCGTCATCGGGTGTGAGTCTCAAATCCTTAGTCCGGCAAACATCG
CCGCCGCCGGGTCAGATCAACCGGTTCGTACCGGCTCGACTCGTTGTCCAATGCGGGTAC
CGGTTTGACTCAGCCAACACGAACGCTAGTACTGTGCATACCAACGGTGTTCCGGCGAGC
AACAACTTCGCCGGCCATGTCGGAGCGTCAAGAGCTGACTGGCAGAGCTCTTGCGCTATT
CTGGCTAGCAAGGTTGTTTCGCAGCAGCAGGATACTGAGAAAACAGGTGGAGCTGGTGAG
ATTACTGTCGTGAACGGACACAAAACACTGGATCTCGTTCCTATTGATAACAATCTCCCC
AAGCCGCTCACGATTACTGATCTCTCTCCTGCGCCGTTGCACGGCTCGCAGCTTCGTGTG
GCCTACCAAGGAGTACCTGGCGCGTATAGTGAAGCTGCTGCTGGAAAGGCTTATCCTAAA
TGTGAAGCCATACCTTGCGATCAATTTGAAGTTGCATTTCAAGCCGTGGAACTCTGGATC
GCAGATCGTGCAGTACTCCCTGTAGAAAATTCTCTTGGAGGTTCAATTCACCGCAACTAC
GATCTCCTCCTCCGTCACCGTCTCCACATAGTCGGCGAAGTCCAACTTCCCGTTCATCAC
TGCCTCTTAGCTCTTCCAGGCGTTCGTAAAGAGTACCTGACCAGAGTCATCAGCCATCCA
CAAGCCTTAGCCCAGTGTGAGCTCACTCTCACAAAACTCGGCCTAAACGTAGTGCGTGAA
GCCGTCGACGACACCGCCGGAGCTGCGGAGTACATCGCCGCCAACAACCTCCGTGACACA
GCCGCAATCGCGTCCGCTCGCGCCGCAGAACTCTACGGTCTACAGATCCTGTCCGAAGGA
ATCCAGGACGATTCAAGCAACGTGACTCGATTCGTGATGTTAGCCAGAGAACCAATAATT
CCACGAACCGATCGTCCATTCAAGACGAGTATAGTTTTCGCACACGACAAAGGAACGAGT
GTACTGTTCAAGGTGCTATCAGCTTTCGCTTTTAGGAATATCAGCTTGACGAAGATCGAG
TCTCGGCCACATCGTAACCGGCCGATTCGATTGGTGGATGATGCGAATGTGGGAACGGCA
AAGCATTTTGAATACATGTTCTATGTAGATTTTGAAGCGTCAATGGCGGACGTGAGGGCA
CAGAATGCGTTGGCTGAAGTTCAGGAGTTCACATCTTTCTTGAGGGTATTGGGTAGCTAT
CCTATGGATATGACCCCATGGTGTCCATCTAGGGAAGAGTAACAATTCTTTTTCCTACTC
AAAATATGAGACGTGAACAAATAATTATTTTCTTTAATTTGTAATTATATTTTCCGAATT
AGGAAAAATACAAGCAATTTAAGTTTAATTCCATTTAAATTTTCTTTCTC
