Microarray Probes on PGSC0003DMT400018190
Probe ID | Chip | Probe Sequence |
---|
CUST_17928_PI426222305 |
JHI_St_60k_v1 |
GCCCTGTTGAGTTGGTATTTATGCCCCCTTGTATGTGTATATATATATATATATAGCCTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400018190
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400018190 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G14720.1 |
+1 |
7e-15 |
75 |
64/146 (44%) |
MAP kinase 19 | chr3:4946057-4948906 FORWARD LENGTH=598 |
Transcript Sequence (908 bp)
>PGSC0003DMT400018190 908 pgsc_dm_v3.4
GGAGCAAATAAGGATGAGGAGTGATCATATTTAAAGGTGCCCTAATGAGTATATACGGAA
TGCTGAAAGTTAGGAAGTGTTGTATGCTTGTTGGAATCGCTTTTAATGTCCTTGTCAAAT
ATTAGTGATAGTGGGTTGTGCATGTCTGTTTGTTTGATTCTTCTTTAATATTCATTTCTA
TCATTTTCAGCCAAACCTGGAAGAGTTTTAGGACCAGTTTTATCATATGATGGTGACAGA
AGCATCAAAGAAGTCACTGATGGAAGAGTATATCCCCAGAACTCTGTTGTCCAACCTCAT
GGCATGTCTCCACATTATCTGTTCAGAAGTAACTCTACACATCTAGAGAGGTGTGGGACA
GAAGCAGAGAAGGACCGCTCTCAAGTTAAACCGCAACATGGCCAGTGCATGGCTGCCAAG
TCGTCCGCTAGTATGAGTTTCGAGATGAGCACTAACCCATATTACCATACACAGGCAAGG
GTAGCACAGTTGGGAGGTCAAATCGCCATGGATGCAAAACTACTACAGGCACAAACACAG
TTTGGTGCAGTCGGTGCTGCAGCTGTTGCTGTTGCCGCTCACAGAGAGGTTGGCACTGTT
CAGTATGGTCTAACCTAGTAGATACTATTGTTTGATGGTTCTTTGAATCAAGTGAGGACA
TCCCCCTTGCAGTGAGACAGTTCAAGATGTGCATTTTCCCTCAGATCAATCAGCATGGGA
GATCTGAAGAGGGATCTGTTAACCCGGTAGATGAAAACCATTTATTAGTCGTTAGGGTCT
CTAAATAGGTATTCTTTAGGTTCAGGTTGCCCTGTTGAGTTGGTATTTATGCCCCCTTGT
ATGTGTATATATATATATATATAGCCTATGCATCATTGATATTAATGAAGAAAAAAATTG
TTCTTCTG