Microarray Probes on PGSC0003DMT400018046

Probe IDChipProbe Sequence
CUST_13664_PI426222305 JHI_St_60k_v1 CATGTTATGTTGCTTCACTCTTCAAAAATATCGACAGTTGCATCTCAGATCTTTCAAAAG

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400018046

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Source Transcript PGSC0003DMT400018046 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT1G01260.1 +2 2e-176 526 307/601 (51%) basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:109595-111367 FORWARD LENGTH=590

Transcript Sequence (2614 bp)

>PGSC0003DMT400018046 2614 pgsc_dm_v3.4
TTTGGATTTAGAAGAAACATACCCTTATTGCCCTCTTCTCCAATCTCCTATCTTCCCTCT
TTTCTTTGCAAAGATAAAAAAAAAAAGATGTTTGAGCAAATTTGAATTTTTTAGTTTGAG
GATTTCAAATTCCTCATAAGGTGATAAGAGTTTTTGCTTGCTCCACTGCTTCTTGAACTG
CAAAAACTGGTTTGTTTCTCTTTTTATGTTCATTTTTATATCAAAGTTTATATACTTTCT
GGGTATTTTGTGTTTATATAGTTAATGGTTACTTGGGGTTTCAAGATTTTGAGATCTGAA
TGTGGGGTTGTTGAATTTTGGGTATTTAAAGAAGAAAGATTGAATCTTTTTTGAGGATTG
AGATAGGTTTTGTTTTGGATTTGATTGAAAAGAGATTGTGTTTTTTTTTTTGAATTTTTT
GTGGGGTTTATATCAAATTGGAGGAGAGTTGAAGTTTTTAGCATCTGGGGTTTTGTTAGA
AATGACTATGTTGTGGAGTGATGAGGATAAGACTATGGTGGCAGCTGTATTAGGAACAAA
AGCTTTTGATTACTTGATGTCTAGTTTAGTTTCTGCTGAATGTTCTTTAATGGCAATGGG
GAGTGATGAGAATTTGCAGAATAAGCTGTCAGATCTTGTGGAACGTCCGAATGCAAGTAA
TTTTAGTTGGAATTACGCCATTTTTTGGCAGATTTCGCGGTCTAAGTTGGGGGAGTTGGT
GTTAGGATGGGGAGATGGTTGTTGTAGGGAAGCTAGGGAAGGAGAGGAATCTGAACTTAC
TAGGATTCTTAATCTACGCCTCGCTGATGAGGCTCAACAAAGAATGAGGAAAAGGGTTCT
TCAGAAGTTGCATATGTTTTTTGGTGGAACAGATGAAGATAACTATGTGTTTGGATTGGA
TAAAGTCACCGATACTGAAATGTTCTTTCTTGCTTCAATGTACTTTTCGTTTCCTCGAGG
GCAAGGTGGTCCGGGGAAGTGTTTTAGTGCTGGTAAACATGTGTGGTTATCAGATATTAT
GAGGTCGTCTGTAGATTATTGTTCCAGATCTTTTCTGATGAAGTCTGCTGGTATGCAAAC
AGTTGTTTTGATCCCAACTGATATAGGGGTTGTGGAATTGGGATCTGTACGAACTATACC
AGAAAGTTTGGAGCTTGTACATTCAATAAAATCTTGCTTCTCGTCGTTTTTGGCTCAAGT
TAGGGCTAAGCAAGCAGCATCTGTAGCAGATGTAGCTGAGAAAAAAAATGGAAGCAATTC
TATGTTTCCCAGCTCTTTTCCTTTTGAGCAGTCAAAGGGAAATCCTAAGATTTTTGGGCA
GAATTTAAAATCTGGTTCTACCGAGTTTAGGGAAAAACTTGCTGTCAGGAAACCGGTGGA
TAGGCCACTGGAAATGTACAGAAATGGAAACAGGGCTCCCATCATAAATACACAAAATGG
TGTACGCCCCGTAGCATGGGCTTCATTTGGTAATGTGAAGCCAGGGAACTCGGTGGAGCT
CTATAGTCCTCAGGCACCACCAAACAACTTACGAGAGTTTGTCAATGGTGGAAGGGAAGA
GCTCCGGTTAAATAGCCTCCAGCATCAAAAGCCTGGTAGAATGCAAATAGATTTCACCCA
CTCAAGACCCGTTGTTTCTCCAGTGCCCACTGTTGAATCCGAGCATTCAGATGTTGAAGT
TTCATGTAAGGAAAACCATGCAGGACCAGCTGATGAAAGGAGGCCTCGAAAGCGTGGAAG
AAAACCAGCCAATGGTAGGGAAGAGCCCCTCAATCATGTAGAAGCTGAGAGGCAACGGAG
GGAAAAGCTGAACCAGCGGTTCTATGCATTACGAGCTGTTGTTCCAAATATTTCCAAAAT
GGACAAAGCTTCCCTCTTAGGAGATGCCATTGCTCACATCACTGACATGCAGAAGAGGAT
CAGGGACACGGAAAATGAGCTGGAAAGGCTAGGAAGCACCTCTGTGGATGCAGCTGATAT
CAACATTGAAGCTGCCAGTGATGAAGTCATTGTAAGAGCTAGTTGCCCATTGGGAACCCA
TCCTGTAGCAAAAATCGTTGAAGCGTTCAAAGAGACACAGGTCAGCGTTCTTGAGTCAAA
ACTTGCCGTGGGGAATGATACAGTATATCATACATTTGTGGTCAAGTCCAGTGGATCGGA
ACAGCTAACGAAGGAAAAGTTAATGGCTGCATTTTCTGGTGAATCAAACTCTCTCTAGAC
ATTCTCATCGATCCGTAGGATAACAAAGGCAATATCATTTTAGTCGACATTACATTTCTT
TGTTTCTGCAAAGGTTTTGGTATACAACAGTTCAGTCTAGGAATAGAGAAAATAACTAGC
TATTGACAAAGTAGCGGCAATTCTTTCCTATATCTGTTTATAGTATACATGTTTGTCAAA
AGAAAGCTAGATGAATCGCTTTGTAAGCTTAAATCTCTTTTGCTTATGCTAGTTTTTTCA
TATTGTTACTTGGTGTTATTAGTGTTCTTGAGTTACTTCTCTAGAATCTTAAGTCCAGGT
TTTTTGCTAGTCTAGCATGAAGCTAATCAAGTAACATGTTATGTTGCTTCACTCTTCAAA
AATATCGACAGTTGCATCTCAGATCTTTCAAAAG