Microarray Probes on PGSC0003DMT400018046
Probe ID | Chip | Probe Sequence |
---|
CUST_13664_PI426222305 |
JHI_St_60k_v1 |
CATGTTATGTTGCTTCACTCTTCAAAAATATCGACAGTTGCATCTCAGATCTTTCAAAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400018046
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400018046 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G01260.1 |
+2 |
2e-176 |
526 |
307/601 (51%) |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:109595-111367 FORWARD LENGTH=590 |
Transcript Sequence (2614 bp)
>PGSC0003DMT400018046 2614 pgsc_dm_v3.4
TTTGGATTTAGAAGAAACATACCCTTATTGCCCTCTTCTCCAATCTCCTATCTTCCCTCT
TTTCTTTGCAAAGATAAAAAAAAAAAGATGTTTGAGCAAATTTGAATTTTTTAGTTTGAG
GATTTCAAATTCCTCATAAGGTGATAAGAGTTTTTGCTTGCTCCACTGCTTCTTGAACTG
CAAAAACTGGTTTGTTTCTCTTTTTATGTTCATTTTTATATCAAAGTTTATATACTTTCT
GGGTATTTTGTGTTTATATAGTTAATGGTTACTTGGGGTTTCAAGATTTTGAGATCTGAA
TGTGGGGTTGTTGAATTTTGGGTATTTAAAGAAGAAAGATTGAATCTTTTTTGAGGATTG
AGATAGGTTTTGTTTTGGATTTGATTGAAAAGAGATTGTGTTTTTTTTTTTGAATTTTTT
GTGGGGTTTATATCAAATTGGAGGAGAGTTGAAGTTTTTAGCATCTGGGGTTTTGTTAGA
AATGACTATGTTGTGGAGTGATGAGGATAAGACTATGGTGGCAGCTGTATTAGGAACAAA
AGCTTTTGATTACTTGATGTCTAGTTTAGTTTCTGCTGAATGTTCTTTAATGGCAATGGG
GAGTGATGAGAATTTGCAGAATAAGCTGTCAGATCTTGTGGAACGTCCGAATGCAAGTAA
TTTTAGTTGGAATTACGCCATTTTTTGGCAGATTTCGCGGTCTAAGTTGGGGGAGTTGGT
GTTAGGATGGGGAGATGGTTGTTGTAGGGAAGCTAGGGAAGGAGAGGAATCTGAACTTAC
TAGGATTCTTAATCTACGCCTCGCTGATGAGGCTCAACAAAGAATGAGGAAAAGGGTTCT
TCAGAAGTTGCATATGTTTTTTGGTGGAACAGATGAAGATAACTATGTGTTTGGATTGGA
TAAAGTCACCGATACTGAAATGTTCTTTCTTGCTTCAATGTACTTTTCGTTTCCTCGAGG
GCAAGGTGGTCCGGGGAAGTGTTTTAGTGCTGGTAAACATGTGTGGTTATCAGATATTAT
GAGGTCGTCTGTAGATTATTGTTCCAGATCTTTTCTGATGAAGTCTGCTGGTATGCAAAC
AGTTGTTTTGATCCCAACTGATATAGGGGTTGTGGAATTGGGATCTGTACGAACTATACC
AGAAAGTTTGGAGCTTGTACATTCAATAAAATCTTGCTTCTCGTCGTTTTTGGCTCAAGT
TAGGGCTAAGCAAGCAGCATCTGTAGCAGATGTAGCTGAGAAAAAAAATGGAAGCAATTC
TATGTTTCCCAGCTCTTTTCCTTTTGAGCAGTCAAAGGGAAATCCTAAGATTTTTGGGCA
GAATTTAAAATCTGGTTCTACCGAGTTTAGGGAAAAACTTGCTGTCAGGAAACCGGTGGA
TAGGCCACTGGAAATGTACAGAAATGGAAACAGGGCTCCCATCATAAATACACAAAATGG
TGTACGCCCCGTAGCATGGGCTTCATTTGGTAATGTGAAGCCAGGGAACTCGGTGGAGCT
CTATAGTCCTCAGGCACCACCAAACAACTTACGAGAGTTTGTCAATGGTGGAAGGGAAGA
GCTCCGGTTAAATAGCCTCCAGCATCAAAAGCCTGGTAGAATGCAAATAGATTTCACCCA
CTCAAGACCCGTTGTTTCTCCAGTGCCCACTGTTGAATCCGAGCATTCAGATGTTGAAGT
TTCATGTAAGGAAAACCATGCAGGACCAGCTGATGAAAGGAGGCCTCGAAAGCGTGGAAG
AAAACCAGCCAATGGTAGGGAAGAGCCCCTCAATCATGTAGAAGCTGAGAGGCAACGGAG
GGAAAAGCTGAACCAGCGGTTCTATGCATTACGAGCTGTTGTTCCAAATATTTCCAAAAT
GGACAAAGCTTCCCTCTTAGGAGATGCCATTGCTCACATCACTGACATGCAGAAGAGGAT
CAGGGACACGGAAAATGAGCTGGAAAGGCTAGGAAGCACCTCTGTGGATGCAGCTGATAT
CAACATTGAAGCTGCCAGTGATGAAGTCATTGTAAGAGCTAGTTGCCCATTGGGAACCCA
TCCTGTAGCAAAAATCGTTGAAGCGTTCAAAGAGACACAGGTCAGCGTTCTTGAGTCAAA
ACTTGCCGTGGGGAATGATACAGTATATCATACATTTGTGGTCAAGTCCAGTGGATCGGA
ACAGCTAACGAAGGAAAAGTTAATGGCTGCATTTTCTGGTGAATCAAACTCTCTCTAGAC
ATTCTCATCGATCCGTAGGATAACAAAGGCAATATCATTTTAGTCGACATTACATTTCTT
TGTTTCTGCAAAGGTTTTGGTATACAACAGTTCAGTCTAGGAATAGAGAAAATAACTAGC
TATTGACAAAGTAGCGGCAATTCTTTCCTATATCTGTTTATAGTATACATGTTTGTCAAA
AGAAAGCTAGATGAATCGCTTTGTAAGCTTAAATCTCTTTTGCTTATGCTAGTTTTTTCA
TATTGTTACTTGGTGTTATTAGTGTTCTTGAGTTACTTCTCTAGAATCTTAAGTCCAGGT
TTTTTGCTAGTCTAGCATGAAGCTAATCAAGTAACATGTTATGTTGCTTCACTCTTCAAA
AATATCGACAGTTGCATCTCAGATCTTTCAAAAG