Microarray Probes on PGSC0003DMT400018023
Probe ID | Chip | Probe Sequence |
---|
CUST_13780_PI426222305 |
JHI_St_60k_v1 |
GAGGACATAAAAATGTTGTGTTGTTTGGCTGGTATTTTTTCATGTAAGGTTCGTCTTTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400018023
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400018023 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G27480.1 |
+3 |
5e-179 |
516 |
254/426 (60%) |
alpha/beta-Hydrolases superfamily protein | chr1:9544607-9546168 FORWARD LENGTH=432 |
Transcript Sequence (1669 bp)
>PGSC0003DMT400018023 1669 pgsc_dm_v3.4
GAACAAAGTTTCTCCATATCCTTATCCAATCACAAAACTAATTTTACACCAATGGCCTTG
TACATTATTTCCCTTCCTCTTTGTTCATTGACATTGTTAATTAATTAGCCATGAAAATCC
TAATCATATTCATAATATCAACAATGTTGTCCACTAATTGCCAAGCAATTACTACTAATC
TCAACCCTCTAATCTTGATACCAGGAGCTGGTGGAAACCAATTAGAAGCAAGATTAACTT
CAAAGTACAAGTCTACAAGCTTATTGTGCAACAAATTGTATCCATTAAATAAAGATAGTG
AAGGTTGGTTTAGGATATGGTTTGATCCAAGTATACTTTTGTCACCCTTCACAAAGTGTT
TTAATCAAAGGATGAAGCTTTATTATCAAACACAATTAGATGATTATTATAATAATCCTG
GTGTTGAGACTAGGATTACACATTTTGGTTCTACTAAGTCCCTTCTTTATCTTCATCCTT
ATCTACAGAAAATTACAGCATATATGGAGCCACTTGTGAAGGCTTTGGAAGAAGTAGGCT
ATAGAGATGGTGAAAATCTGTTTGGAGCACCATACGATTTTCGTTATGGTTTAGCTGCAG
ACGGTCATCCAAGTCATGTTGGTTCGAAATTTCTAGAGGACTTGAAAGAACTGATAGAAA
GTGCAAGTAGTTCAAATGGAGGTAAACCTGTCATTCTTGTTTCTCACAGTTTAGGTGGTT
TATATGTCCAGCAACTACTCGTTCGGAATCCAAAATCCTGGAGTCAAAAATACATCAAAC
ACTTTATAGCATTGGCTACACCATGGGGAGGAACAGTTATGCAAATACTCACTTTTGCTT
CTGGTAACACACTTGGTGTGCCTTTAGTTAATCCATTACTCGTAAGGGAAGAACAGAGGA
GTTCTGAAAGTAATATGTGGCTTTTGCCTTCTCCGAAAGTGTTTAACACTAAATCACCAC
TTGTTGTTACCCCTAATGTTACATACTCAGCTCATGACATCCCGGAATTCCTTAAGGATA
TCGGGTTTCCTGAAGGGGTTTTGCCTTATACATCGCGTATTTTGCCCTTGGTTGACAATT
TGGTAACTAGTACTGATCAAGTGCCTATCACTTGTGTAATTGGTTGTGGGGTTAAGACTC
CCGAGACGTTGTTGTATGCAGATGGGGATTTTGATAAGTTGCCTGAGATTGTGTATGGGG
ATGGAGATGGTACTGTTAATATGGTAAGCTTGTTGAGTTTTGAATCAAATAAGAGTACTT
ACCAACATCTTAATGTCATCAAGTTACAAGGAGTTTCACATACAGGTCTACTAAAAGATG
AAATTGCACTTGAGAAAATAGTTGAAGAGATTTCTTGTATTAACTCTGATATTTCACTAG
TTTCAAAAGCTTGATCACGATTCGTGATGTTTCTTGTTTATTCTTCCCTTATTGTTCATA
TTCGTGTTCGTAGTATGCTTTTACCAGTGATGCAATAGGACAGTTTTAATCAGGTATATT
TGCCCGTGATTCAGATGGTTCTCATCATGTATAACACCATGAAAATGATGTTCATTCTGT
ACTAACATGTGAACATATGAATGTACTTGTATCTACCATATGTGCAGAAGAGGACATAAA
AATGTTGTGTTGTTTGGCTGGTATTTTTTCATGTAAGGTTCGTCTTTTG