Microarray Probes on PGSC0003DMT400017914
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_33300_PI426222305 |
JHI_St_60k_v1 |
GTTGTTGTAATAATGACTCTGTTCTGCAGAGGGAATTGGAATAAATAATATTGGAGCAAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400017914
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400017914 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G01500.2 |
+3 |
6e-84 |
265 |
124/176 (70%) |
carbonic anhydrase 1 | chr3:194853-197873 REVERSE LENGTH=347 |
Transcript Sequence (1330 bp)
>PGSC0003DMT400017914 1330 pgsc_dm_v3.4
TCACTTTTTTCACGTTTTGAATGAATTGTTTCTTTTATTTTTATGTATAGTTAATAACCG
AACCAAACCAAACCAAAATCGAAAACAACCAAACCGATAAATGTATATTATATTTGGTTT
GGTTTGATTTTGATAATTTTAAAACCGATTAAGTTGGTTTGGTTTTGATTTTGACCAATA
ACCGACCCAAACCAAACCGTGAACACCCCTACACACAAGTGCAGCAACAAAAACATTGAA
ATTAAACAAAAGAAAAAGAAAAAATAAACGACTTGAAATGACGAGTGCCTAATAATAATA
TTTTGTTACGTGTATCAGCAAAAATCCAGAACTGTTTGACAAACTCAAAAAAGGCCAGGA
ACCCAAGGTACAAGATCCCGTTTGAAAATAAGTGATATTTTAAATAATTAAAAAATACAT
TAATGATGTTATTCCAATTTTATCGTTTGAGTGTTTTACGTAACCAACAAACTACTGTAC
AATTTTTGGTGTTTGCGTGCTCGGATTCACGAGTGAGCCCAACCAATATCCTCAACTTTC
AGCCCGGTGAGGCTTTTATGGTTCGAAACATAGCCAACATGGTCCCTCCTTATGACAAGC
TTAGGTACTCGGGAACTGGAGCTGCCATCGAATACGCTGTTCTCGATCTTCAGGTAGAAA
ATATTCTAGTCATTGGTCACAGTACCTGTGGAGGTATCAATGCCCTCATGAGTCTTCCAC
AAGATGGTTCTGAATCAACTGAATTTATTGAGAATTGGGTGAAAATTGGATTACCTGCCA
AGGCCAAGGTGCTAACTGAGCATCCAAATATAAGTTTTGAAGAACAGTGCAAATACTGTG
AGAAGGAAGCTGTGAATGTATCACTAGCCAACTTGCTGACCTATCCATTTGTGAGAGATG
GTTTGGTGAATAAAAAATTGGCATTGAAGGGAGGTTACTATGATTTCATTAAAGGAGAAT
TTAAGCTATGGGGACTTCACTTTGGTCTTTCTCATCCTTGTTCTATCTGAATATATTCAA
CTACCATCTTTCTAGTGGGAGAATAGTGACACCTCTTGCTCTTTCTTTTTCTTCGTATTG
TATTCATCTATATAGTTCAGAAAATGTCTAAATAAAATAGAGGGTGGATTCTCCCATTTT
ATGGTAGAAGACAAGTGGTGAATTGTCTTTGTAATAATGACTATGTTCGTTGTATTTGTG
ACGGGGAAAAACCTCTTTATCTTTATGAGTTATAGGTAATGTTTACGTACGTTCTACCCA
TTTGGGTATGTTGTTGTAATAATGACTCTGTTCTGCAGAGGGAATTGGAATAAATAATAT
TGGAGCAACT
