Microarray Probes on PGSC0003DMT400017761
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_33293_PI426222305 |
JHI_St_60k_v1 |
ATACATGGTGGGTTCTGGAAATTCTGTAGGTCATTGTAGGAAGAGCTGTAAGGTTTGCTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400017761
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400017761 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G28490.1 |
+1 |
4e-132 |
379 |
179/250 (72%) |
Oxoglutarate/iron-dependent oxygenase | chr3:10679150-10680654 REVERSE LENGTH=288 |
Transcript Sequence (753 bp)
>PGSC0003DMT400017761 753 pgsc_dm_v3.4
AGGGCTTTCGTATATAGGAATTTTTTGACCGATGAGGAGTGTGATCATCTCGTTACTCTG
GCTAAAGATAAGCTGGAGAAGTCTATGGTGGCTGATAATGAGTCAGGAAAGAGCATAGAG
AGTGAAGTTCGGACAAGCTCCGGCATGTTTCTTAGCAAGGGCCAGGATGAAGTAGTGGCT
AATGTGGAGGCTAGGATAGCTTCCTGGACATTCCTTCCTAAAGAGAATGGGGAATCTATT
CAAATACTGCATTATGAACATGGCCAAAAGTATGAGCCACATTATGATTATTTCCACGAC
AAGGTCAATCAAGAGCTAGGTGGTCATCGGGTGGCTACTGTTCTTATGTATTTGTCAGAT
GTAGAGAAGGGTGGGGAAACCATTTTTCCTAATTCAGAGGCAAAAAAATCTCAGCCAAAG
GGTGATGACTGGTCAGATTGTGCTAAAAATGGATATGCAGTGAAACCTAGGAAGGGTGAT
GCATTGTTGTTTTTCAGTCTTCATCTCGATGCAACAACTGATCCTCTAAGCTTGCATGGA
AGCTGCCCTGTTATCGAAGGTGAGAAGTGGTCTGCTACTAAATGGATTCATGTGAGGTCC
TTTGAGACTCTATTTAATAATGAATGCCAAGATCAAAACCCAAACTGCTCCCAGTGGGCT
ATTAATGGTGAATGTGAAAAAAATCCTCTATACATGGTGGGTTCTGGAAATTCTGTAGGT
CATTGTAGGAAGAGCTGTAAGGTTTGCTCCTGA
