Microarray Probes on PGSC0003DMT400017697
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_13531_PI426222305 |
JHI_St_60k_v1 |
GTCGTTTGATACGAGGGATAAAAGATAATAATTTCATGATAAAATGCAGGGTTAGGGGTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400017697
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400017697 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G30500.2 |
+2 |
3e-30 |
115 |
59/100 (59%) |
nuclear factor Y, subunit A7 | chr1:10804736-10805896 REVERSE LENGTH=190 |
Transcript Sequence (1087 bp)
>PGSC0003DMT400017697 1087 pgsc_dm_v3.4
AAAAATGTTGTGTTGTCAGGTACATCCTCACTTATTTGAAATTCATCATGCCCGAATGCC
TTTGCCTCTTGATATGGAAGAGGAACCTGTCTATGTGAACGCGAAACAGTACCATGGAAT
ATTAAGGCGAAGACAAATAAGAGCTAAAGCAGAGCTTGAAAGGAAAGCTATTAAAGCGAG
AAAGCCATATTTGCATGAATCTCGGCATCAGCACGCTATGAGAAGGGCAAGGGGATCTGG
GGGCCGCTTTCTGAATACTAAAAAGGGCAATGACATGGACTGTACACCAGAGGAGACGAA
AAAATATGGGGCAACCATTCCAACTCACTCTGGCAACTCGTCAGGTTCCGGGAGTTCTGA
TCAAGGGGGAAAGGAAGGATCTACAGTTCAAGACATGCACAAAGGACACAGCCACAGTTT
CGCAACTGGCAATGGCCATGGTTCATCTGTGTATTTTGCCCAGAGCACTGGAAGTGAGCA
AGGGAATGGCCACTACGGTCGCGGAAGTTGGAACCTGCTGGTCAATCAGGCTTCTCAGGG
GGCAGCTTCCAGCAATTAAGAAGCTACACTCCACTGATGGAGGGGTCAGCCCAGCATTTT
CTTGTGCCATGGGTCCATTTCTTGCATCGTTCATGCAGGCAATGCTGAACATACATGCAA
GGTGGCATGGGGCTATGCTCAGGCAATTCATTCTTGGCTTGGTTACTTGTACTATATGAG
CGTCGATGAGGAAGAGAATAGCATATGGCGAGTATGATACGTTACAAATTCGCCATTTAT
TTGTCTTTCCTCTCACCCTGTATGTAAATAAAGAAAAATATATGTCGGAATGTAAGATTA
GAAGCAGTTTGGAATCTGATACTTCAAAGTACTGCAGCATCTTGAATGTGTTTGGCTATT
TGTAGGATGGGTTTGTAAAATTGACACACACTGAAGTTGCTTTTATGCTGTTTGCTTGAT
TTTCCAATGAGGATCTGCAATCCTCTCATCCATTGAACACTTAATTCTTTATCTAGTACT
CTAATAGGTCGTTTGATACGAGGGATAAAAGATAATAATTTCATGATAAAATGCAGGGTT
AGGGGTA
