Microarray Probes on PGSC0003DMT400017573
Probe ID | Chip | Probe Sequence |
---|
CUST_13564_PI426222305 |
JHI_St_60k_v1 |
CTGGAAATTCTACTCTTTGACCTGTTATTGCAACCTTAATTTTAGTTTGCAGAGAAGTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400017573
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400017573 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G63940.1 |
+3 |
0.0 |
609 |
341/674 (51%) |
Protein kinase protein with adenine nucleotide alpha hydrolases-like domain | chr5:25588254-25591229 FORWARD LENGTH=705 |
Transcript Sequence (2715 bp)
>PGSC0003DMT400017573 2715 pgsc_dm_v3.4
AAAAAAGGCAAGGGTAGTGTGCGATTCTCTCTCTCAAAACCCTCCAATGAATTTCTAGTG
AGAGAAAGAGAAAGAAGAAAACTCCGATTACATAAACACTGCGGCCTTGTTGGCTACAAA
TCGGAGCAATGAAAGTATCTAATGGAAACTGTAGTTGTGCAGTGGAAAGAGACGATAGTA
ATACTACTACAACTAGTAGTGTCAACGATAGTAATACTACGACTGGTAGTCTCAGTATAA
GTGGTGATGACGGCGCCGGAGAAGTGGGTGGAAGGGTGGTGGCAGTGGTGGGAGTGAAGT
TAGATTCCAGAAGTAAAGAGTTGCTTACTTGGGCTTTGGTTAAGGTTGCTCAGACTGGAG
ATCATGTAGTGGCTGTACATGTTATCGATCCAAATTCTGATAAATCAGAACCTCTTTCAC
TGGTGAAGTCATTTGACTTGATGCTGGCTGCTTATGAGGGCTTCTGCAATTTAAAGCAGG
TGCATTTGAAGCTTAAAGTCTGTCGAGGATCACCAGTTCGTAAAGTTCTTGCTCGCGAGG
CGAAATTGGAAAGTGCTATAAATTTGATTATTGGGACTTCAGGCAGTCATCATGCCATTC
GGTCGTCAGTGTCACTTGCAAAATACTGTGCTAGGAAAGTGACAAAGAGCATCTCTGTTA
TTGCCGTTGACAATGGCAAGATTGTTTATCAAAGGGAAGCTAGTGCTTTGGATGGAGATG
AATCTAGTGACTCAGATGTGCCCAAATCAAGATTCAAGAGGAGGAAGACACTGAACAAAA
GTCCTCTGAGCTTAATGCCTAAGAAAGCTGTGGAAGAAAACTCTTGTACAACAGAGAACA
ATTACATGGCTTTGGTGCCTGTTAAGCCTATTGAAGTCCGGGAGTCAAAGTCTCGCTGGA
CACTGCTTCGACGAGTTTTTCTTCAGAACATAGTGGCACCTGATAAATTTCCCGCAAAAA
GGTCTTCTGTGATGCATTGGGTTTGGAAACGACCAAGTCGGCAATCTTTTGCAGCTATCT
ACCCTGATCATAAACAGAGTGTATCTGACAAGGATGAGCCTCATTGTACAAACTTGGATG
AAGGGAAGGGGGCAATTATTCCTGTCGGAAGTGATGCTGATCCAATTTCAAATGAATGCT
TTATTGTCCTTCCTGAGGAACTGGAGGGTCTTACTGAAAGGTACTCATCAATGTGCAGAT
TGTTCAATTACCAGGAGCTTTGTTCAGCAACATCTGATTTCCTGCCAGAGAATTTGATTG
GAAAAGGAGGCAGCAGTAAGGTTTACAAAGGGTGCCTTCCAGATGGCAAGCAACTGGCTG
TGAAAATATTGAAGCCATCAGAAGCTGTGGCACAGCAATTCCGTTCAGAGATAGAGATAC
TCACAACTCTGCATCACAAGCACATTATATCACTGATTGGGTTTTGTTTAGAGGAGAACA
ACCTTTTACTGGTTTATGATCTGTTATCCAGAGGAAGCTTAGAAGAGAATCTCCATGGTT
CCAAAAAGGATGAAAATTCATTTAGCTGGGCAGATAGATACAAGGTTTCTTTGGGTGTTG
CTGAGGCACTGGACCACCTACACAATGCAGCTGATGGGCCCATAATCCACAGGGATGTGA
AATCTTCAAACATTCTCCTGTCCGATGATTCTGAGCCACAGCTTTCAGATTTTGGACTTG
CAACACCGGCCTCAAGCTGTTCAAATCATTTAGATAGCATTGATGTTGCTGGAACATTTG
GCTACTTGGCTCCTGAGTACTTTATGCATGGAAAGATAACTGAAAAGATTGACGTGTATG
CATTTGGTGTTGTTCTCCTTGAGCTTTTGTCTGGTAAAAAGCCAATTGATAATGGCAATG
GGAAAGGTCAGGAAAGCTTAGTCATGTGGGCGAAACAAGTTCTGAAGGGTGGGAACACGA
AGGAGTTGCTAGATCCGAGCTTGATTGACACTTATGATCATGATCAATTTGAGAGAATGG
TCTCGGCGGCATCACTGTGCATCAGACGAGCTCCTGGAATTAGACCTCAAATTGACATCG
TGGTAAAACTCCTCCAAGGTGAGGCTGAAACAATTAAGTGGGCGATTGAAGAAGGCAAAT
TTTCAGAAGAAGTAGATGCTGTCGATGGTGAACAACCACCCTCAAACATACAATCCTTTA
TTAATCTCGCATTGCTGAATTTGGAGGATGAGTCCTCACTTTCATGTACCAGCACGGGAC
CAACCATTTCCGTGGAGGATTATTTGCAAGGGAGATTTAGTCGCTCTTCAAGTTTTGACT
AACCATTCCTATGATAGATGTCTATGGCTATATATCAAGTAACCCTTTTTCTGTAAATAC
CGAGCTTTCCTTGTTGATTGATTGCCCCCATCACTGGGTCCTGGTACGAGAGGTTTACAG
CCATTAACCTCCTCCTTTGCCTAGCCTGGGATGATTTTTTCTTCAACTATCTCCTTTTTC
CACAGCTTCTTTTTGGGGTGTAGTAACAAATGCTGCCAAGAGTATGAGCAAATGATTAGT
AGATTGTCACAGGTGAGTTATTGTAAATCAAATCCAAAGTTGAGTTGTAATTAAACATCT
GAGTTCATATGTAGTTGTAAGAAAATAGCTTTAGTTGTCAATAGAGAGGTTTAACCATTT
CTGGAAATTCTACTCTTTGACCTGTTATTGCAACCTTAATTTTAGTTTGCAGAGAAGTGT
TTATTACTCTTGCTA