Microarray Probes on PGSC0003DMT400017518
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_13483_PI426222305 |
JHI_St_60k_v1 |
CAAAACCAGCATCAAGTGCATGTATTGCAAATGACTCAATACAGTAACTGCATTTGTAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400017518
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400017518 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G64290.1 |
+2 |
4e-83 |
282 |
147/205 (72%) |
dicarboxylate transport 2.1 | chr5:25714495-25716642 REVERSE LENGTH=563 |
Transcript Sequence (3011 bp)
>PGSC0003DMT400017518 3011 pgsc_dm_v3.4
GTTTCCGCCACCCCAAAGGCCCCTCAAACACCCTGACCCTTTTTTTCATTTCCATAAATT
TTCCACATTTCATCTCTTTCTCTTCACTTCACTCTTTGCCGGAGAAAAAAAAATGGAGAG
ATTGGCACTTCACTCTCCATCTTCAGCCACCTCTGCCGCCGCAGCCGCCACCACATCCTT
CTCTCGTCTCTCCTACCACCATCTCCGATCACGTTCCTCCGCCATTCCCACCGCTGCTCT
CCGTCCAGTTTCCTCCCTTCGATCATCTATTTCCGGTTCAAGATTCAATCTTACCGGCCC
AAGATTCAATCTTTTTCATCCCAAACCTTTCCTTTTCAATCCCCTTTCAAAACCCACTTC
AAGAAATCCACCGTCTCCCAAACCCATCACTGCTTCTTCATCCCCTGAATCAGATAAGAT
AGTAATTGTAGATGTAAAGCCCAAACCCCAGGGTGCGAAGCTCATTCCTTTGATTATTTC
TGTTTCAATTGGTCTTATAGTCCGTTTCTTGGTTCCAAGACCACCTGAAGTTTCTCCTCA
AGCATGGCAATTGCTCTCCATTTTCCTATCAACAATCGCTGGTTTGGTCCTCAGCCCATT
GCCAGTAGGTGCATGGGCTTTTCTTGGACTTACAACCTCAGTTTTGACCAAGACTTTAAC
CTTTTCAAGCGCCTTTAGTGCCTTCACGAATGAAGTCATCTGGTTAATTGTGATTTCTTT
CTTTTTCGCCCGTGGGTTTGTCAAGACTGGCTTAGGAGATCGAATTGCCACATACTTTGT
TAACTGGTTGGGGAAGAGTACTCTTGGTTTGTCATATGGATTGGCCCTGAGTGAGGCTTT
GATTGCACCTGCAATGCCCAGCACTACGGCAAGAGCTGGTGGGGTATTTTTGCCTATTAT
TAAGTCTCTCACTTTCAGCTGGAAGTAAGCGTGGTGATCCCTCATCCAGGAAGCTAGGAT
CTTACTTGATTCAATCTCAATTTCAGGTATGCCTGATATAGATGTGTGGTGTGTCACATA
ATTAGATGACTTTAATGAAATGTAAAAACACTCTCTATGGATACATGAATTAGTACTGAC
CAAATGATCCTATTATTCAAGAATTCAATCTATATACACTAATGGTGAAAATAGTTTTTG
AGCCATTAAGGTAACATTAAGTTTGTAACCTGGAAAATAAGGTTATTAGCATGCTAAAAT
AGGTTAAACTATTAAGTTATATCCATAGGGTAATTTTTGAGTGATCTTTGTCTGAAGACT
AATATTTATCTTGAATTTGCAACAGAAGACATTATGCATTTGATCAAGTATTACTATCTT
TTCGGTTTGTTGCATCTGTCTCTTTTAGGAATACATAACATATATGGGGTATGGAATGAT
GTCAGCTATATGAAGCTCTTAACCTGCAAATTCATTACTGAGAACTCAAATCTATCTAGA
ATTGCTTTAATAGCTTCCATAACTAAAAGGGATAAAAATGAATTGTTTGGTTGTTGAAAA
TAGCTTTACCTGTCAGCACTTTAATTTTTTTTTTGCCTTTAAAAACAATGAAAAACAGCT
TTATCACATGTTGTTTTGTATTTTTAAATTAAAATTAGCTATATGTTAAAAAATAGATGT
CAAAAAATATGTGTGGAAATATAATCCTCTAGCCTTTTCATATTCTCAACTCTCAAGTGT
ATAAAAGATCTTGATTCTGGAGAAGAACAAAGGGGGATGTAGGGGCATTTCGATATTGTT
GTGGTGATTCCGAACATTTTCAACATGTAGGTTGAAAAATCTGATGCGAAGTCTCTGTTG
ACCAAACTGTCTAGAATATGTGTGCATTCTTCCTGTTTCTCGAGTTCTTCGTTACATTGC
TTGGCTGATTATCCCTTGTGCAATAGACATAATATATATGTTGATATTTTATCATGTTGT
TATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGGCTTCAATAAATTTT
AACATGCGTGCTTATTTGTCGTTCAATTGGAAAATAAGGGTAGTTGTATAAACCAACTAA
ATCAGAGAGCACGTCGTGGAGGCCTATGTTTCTATCCCCCGCAAAAGCTAAGGAAAACAT
GTAATGGAGGCCTATGTTTCTATTCCCCGCAAAAGCTAAGGAAAACATCTCTAACTTGTT
AGCATGGACGCCGATGTACTTGAAAACATGATCTGCAAGGAGGCCAGAAAGAGAGTCGCT
GCAATTGCTTGCATTGTTGCAAATTCCCCCAAAACCAGCATCAAGTGCATGTATTGCAAA
TGACTCAATACAGTAACTGCATTTGTAAAAAAAATTGAGAATATCTCTTGTTAAATTTTG
CATTTTTCTTTGTAGATTACCCTTTTCTGAGTACTTGTGTCCTTGGAGGTGCAAAAAACC
TATGTGACAACCCTGATTACCTAACCCTTGGACTGCTTGACACTGGTTTTGGGGCCATCA
TTCACCATTGCAGGCAATTGTGACGACTTCCCCGCTCACACCTCCACTACGTACTCCTCC
AGTTGTGTAAGCGTTTGTAATCTGGAGAGAAGAGACTGCCCCTTCAGCAACGACTCTCTG
TTGGTCAATGTTGCAAAGCTGGAGACGGTAGGATATCTTTAGATGCCTTGTTGTTCAGTA
ATTTATGGATCAGAAGTTACCAAGGGTTAATGTGTGTAATGTGTACTTTTACTTTTTCTT
AAGTGTGTAATGTGTAGTGCTTTCTGTACAGGTGTAGCACGTATTTTATGTCAAAAAAAA
AGGAAGGAAATATCCCAATTCATATTGACTCTCACACCTTCCGCTTTACTCTTCCTCTCT
CCATTGCAATTTTCATGGTAGTCATTAGCGTGTGAAATTCAGCTTCGTACTCCCTTTTAA
GATATTTTTGCTTAATTAATTTAACAAAAAAATTTTGCTCCCGTCAATACTCTTATGAAG
CAAATACACTCTTCTTCAACTGTCTAAGAAATTCTAATCATTTGATCAATTTCATTGTTC
ATCCTTCTTAA
