Microarray Probes on PGSC0003DMT400017452
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_13461_PI426222305 |
JHI_St_60k_v1 |
GATCACGAGAATAAGAAGAAACATAGATAATGGTTCCCAGTTTTATGGTACCAAGTATCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400017452
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400017452 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G12470.1 |
+1 |
4e-140 |
410 |
200/287 (70%) |
Protein of unknown function (DUF3411) | chr5:4044950-4047290 REVERSE LENGTH=386 |
Transcript Sequence (1321 bp)
>PGSC0003DMT400017452 1321 pgsc_dm_v3.4
CCAATGGCGGCCATCGCCACCGCCACGGCCACCTCCTACCTCTCTACCACCTCTCTCAGC
CGCCACCAATCTTCAACTTTTCGTTTCTCATCCCTCACTTACCCAATCAATTTTTCAACT
TTTTCACTTAATGCCCAATTTAATCCTCCTCGTACTTCCTTCCCCATATTCTCCACTCTC
AGTAATCACCACGGCGGCGGAAACATCGACGGCGGCGGAGGTGGCGGCGGAGGAAGTGGA
GGAGATGGAAGAGGAAAGGATGACGGGAATGCAGGGGAAAGGAACAAGAAAGAAGCAATA
ATGGCTTTGGCTGAAGCCGAAAGGACATTAGACAGCTTGCCTAAGGACTTGGCTTCCGCA
ATTGAAGCCGGGAAAATACCTCCGGCCGTCATTCACCGGTTTTTGGAGCTCGAAAAGTCA
CCGGTGCTCCGGTGGCTGCTCAGCTTTGGTGGATTTAGAGAACGGTTGCTGGCTGATGAT
CTTTTCTTAACTAAAGTTGCTATAGAGTGTGGCATTGGAATTTTTACTAAGAGTGCTGCA
GAGCTGGAGAAGCGTAGGGAGAATTTCACAAAGGAGCTGGACTTTGTCTGTGCTGATGTG
GTGATGGCCATTGTTGCTGATTTCATGCTGGTTTGGCTCCCAGCTCCTACTGTCGGTCTC
CGTCCTTCTCTTGCAATTGGCTCTGGGCCTCTTACTAAACTTTTCTACAACTGCCCGGAC
AATGCATTTCAGGTGGTGTTGTCTGGCACTTCCTATTCATTTTTACAGAGACTAGGCGCC
ATAGTGAGAAATGGGGCCAAACTATTTGCAGTTGGTTCAGGTGCATCTCTGGTTGGTACA
GGTGTAACAAACACTTTAATCAACGCACGGAAGGCTATTGATAAAACTTTTGCTGGTGAA
GCTGAGAATCTACCAGTTCTGTCTAGCAGTGCTGCCTATGGTGTTTACATGGCATTTTCA
AGCAACCTTAGGTATCAAATCCTTGCTGGAGTTATTGAACAACGAATATTGGAGCCCTTG
CTACACAAGAACAAGATCATGCTTGGTGCACTGTGCTTCGTTTTTCGAACTGGCAATACC
TTTTTGGGATCATTGATGTGGGTGGATTTTGCACGTTGGATTGGAATCCAAAGATCACGA
GAATAAGAAGAAACATAGATAATGGTTCCCAGTTTTATGGTACCAAGTATCATTTGTACA
ATTATTTTTTAAATTCAATTATAACAGTGGTGAGATTTTTTGGCACACTCTTTATCGGTG
CTTTATTTTGTTTAATTCAAAAGAAGTATGGCTTCAAAATCTCTTGATTGTGCAAAATTT
A
