Microarray Probes on PGSC0003DMT400017403
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_13545_PI426222305 |
JHI_St_60k_v1 |
ATCCGTCTATACGCTCATTATGCTTTGTAGATGGCAGAAAATAAGTGCTCCTGAGAGTAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400017403
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400017403 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G13800.2 |
+3 |
4e-98 |
315 |
150/242 (62%) |
pheophytinase | chr5:4452063-4454141 REVERSE LENGTH=484 |
Transcript Sequence (2198 bp)
>PGSC0003DMT400017403 2198 pgsc_dm_v3.4
AATAGGAGTATATAACTAACAGAATATTAAAAAGAAGGCAATTCTAACTTCTCCTAGGCT
CTTGGAGATTTTGCTCATAATTATCTTAGAAAGCTGATTAAAGGTATTCATTTTAGAAAG
CTGACTGTAGAATGGAAATTTGTTCTTTCTATTCGACACCCTATTACTGCGTTGTAAATG
TTAAACCGAATGTGATTCAAAAATGCCTAATTTCAAATCAGGCAATGTTTCCTAGACTAA
AAGAAAGAAGATTGTGTTCTGGTTCAGATGTTTATAGCGTAACGAAAAACAAGAACCAGA
GATCTTGCACTGTTGCTTCTGTAAAGGGGGTTGACAGTGTTGACTCAACTCTCTTGAGTG
AAAGCTACAGCTCAGATGTGGTAGATGGGAAAGTCGGTACGCAAGGTGTGACTAGTAGAG
GTATATCAGTACCAAAGGTTATGATTCCTAGTTTACCAAGTGAAGCTAAAGGTGATGCTG
TTGCTGTGATTGATAGCTGTTTGTGGGAATGGAAGCCAAAACTGAATGTTCATTATGAGA
AATCTGGATGTCAAAATGTTAACTCCGCGCCAATACTTTTTCTTCCTGGTTTTGGTGTTG
GTTCCTTTCACTATGAAAAACAACTGAAGGATCTTGGTCGTGATAATAGAATATGGGCAT
TAGATTTTATTGGACAGGGGAAGTCATTACCTTGTGAGGATCCAACATCACGGTCTAAAA
GATTAGATGAATCGGTAGGTGATGGAAACAATGTTCTCTGGGGTTTGGGGGATGAAGCAG
AACCTTGGGCAAAAGAACTTGTCTATTCTATTGACTTGTGGAGGGAGCAAGTACGCTATT
TCATCGAAGAGGTTATTAAAGAACCAGTCTACATTGTGGGAAATTCACTTGGTGGATATG
TTGCCCTCTACTTTGCAGCATACTACCCTCAATTGGTGAAAGGTGTGACCTTGCTGAATG
CGACGCCTTTTTGGGGATTTCTTCCTAATCCTGTTAGATCTCCAAGATTATCTAGATTGT
TTCCATGGGCTGGTACTTTTCCTCTGCCCTCCAATATCAGAAAGCTCACAGAACTTGTGT
AAGTGCCATGACTTACCCTTTTGATTCCGTAGTTTCCTGATCTTATAAACTTATATACCG
AGTAATAGGATCTTCTTGCCAGCAATACTGTTTATATTGATTATCATCAAGACCATGACC
AAATGATGTGTTGTTATATTTTTCAACTCACGCTGATGCATCATTGTTGGATAATTTGAT
GTTCTTTCATCATACTAATAGAGGAACATTATGGCTTGTTTTGGGTTTTGGCTGGTTCTC
AAACTTATCCGTCTATACGCTCATTATGCTTTGTAGATGGCAGAAAATAAGTGCTCCTGA
GAGTATCGCAGAGGTGCTTAAACAAGTTTATGCTGATCATACCACAAAAGTGGATAAGGT
TTTCTCTAGTATTCTTGAGGTAACAGAACACCCTGCAGCAGCTGCATCCCTTGCCTCAAT
AATGTTCGCTCCTCAGGGACAACTAAATTTCAAAGAGGCACTGACTGGGTGTCGAATGAA
CAATGTACCGGTCTGTCTCATTTACGGGAAAGAAGACCCCTGGGTGACGCCTATTTGGGG
TTTACAAGTGAAACGCCAAGTCCCTGAAGCTCCATACTATCAGATTAGTCCAGCTGGTCA
CTGCCCCCATGATGAAGTCCCAGAGATTGTGAATTTTTTGCTGCGCGGATGGATCAAGAA
CGTTGAATCGGATAGTTCAGTTGCATTGCCTCTGCTAGATTATCCAGAAAGCGTTGAATA
CGACGTTGTCAAAGAATTGGAATTTGTTCGGCAAGGAGTGAAAAAATCAGCAAAAGTGCA
ATTTTATGGATCAATGACTTCTCAATGGGAGAGGCTTGGCATGTTTTTAAAATCTAGATT
CCAAAATGGAGTTTACTCTCCATAATTGCACATATTTTTTTTTTTCATTTCTTTGTATCC
ACATATTGTGTGATCAATGTCCACCCATGCCTTCATGTTCGTGTGTTACATAACAATTTA
TGTAAATTGTAATTAGGTCAACATATATTGAGTGTAAAAAAAGAAAACCTAATTCCTTGA
TTAAATCTTGTTTATCATTGACAAAAATGTCAATACCATGAACAGTCCATGTTTGTTAGA
AATCATTAAAATGATCAAATAAGAATTACTATGACAAC
