Microarray Probes on PGSC0003DMT400017390
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_13518_PI426222305 |
JHI_St_60k_v1 |
GAGAAGGCTAGCTAGATTCAGTAGCACTTCAAGATATATAGATTATTAGGCAAAAAGAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400017390
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400017390 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G63440.1 |
+3 |
0.0 |
710 |
351/527 (67%) |
cytokinin oxidase/dehydrogenase 6 | chr3:23424291-23426265 FORWARD LENGTH=533 |
Transcript Sequence (2095 bp)
>PGSC0003DMT400017390 2095 pgsc_dm_v3.4
AAAAAAATCCTTCAAATTCTTCCACTTAAAAGTAGCTAGTCTTCATACGGTTTCTTTACC
ACTCAATATAAGTTGACTCTACCACTCATATAATCTTTAAATTTCCTCCTCAATTCTTCT
TTCTTCACAACCAAAAAAAAAAAGAGATCTTTCTTCCATTTTTTTATAAAAAAAAAATTA
TTGAAGAGATGACATGCCAGAACTTAGTATTAACTCGAAAAACGAACATTTTGTTCGTAA
GAAGCTTTACAATTTTGGTACTAATATGGATAGTTATGAAGCCAGAAGTTTGTTTCTCTA
GTGTCCTGTCTTCATTGAAGGCTCTTCATCTACAAGGCTATATAACTTTTGAAAACAATG
AATTTGCATCCCGAGATTTCGGGAATCAAATTCATTCACATCCTTTGGCAGTAGTACATC
CGAAATCTGTTACTGACATTTCAGAGATAGTAACACATGTCTGGCAAATGGGCCCGGCCT
CAGAACTGACCGTGGCAGCAAGAGGCCACGGTCATTCTCTTCAAGGCCAGGCCCAAGCGC
GTGGAGGAGTTATAATCAATATGGAATCATTACGGCAGGATCAAGAAATGCAAGTTTACT
ACAGAGGAGTACAATTCCCTTATGTTGATGTCTCAGCTGGTGAATTGTGGATAAACATAT
TGCATGAGACATTGAAATATGGATTAGCACCAAAATCTTGGACTGATTATCTACATCTTA
CTGTTGGAGGTACTCTGTCTAATGCTGGAATCAGTGGACAGGCATTTCGTCACGGCCCTC
AAATCAGTAATGTCCGCCAGCTGGAAGTTGTAACAGGTAAAGGAGAAGTCCTAATTTGTT
CACAAGAACAGAATGCTGACCTCTTTCATGCTGTTCTTGGAGGACTTGGTCAGTTTGGCA
TAATAACTAGAGCAAGAATCTCACTCGAAAGAGCCCCGAAAATGGTGAAATGGATAAGAG
TGTTGTACTCTGATTTCTCCACATTTGCTAGAGATCAAGAGCGTTTGATATCTGCATCGA
AAACATTTGATTACATAGAAGGCCTTGTGATTAAGAACAAAACAGGTCTACTGAATAACT
GGAGAACATCTTTTGACCCTCAAGATCCTGTTCAAGCAAGCCACTTTGTATCAGATGGAA
GAACACTCTATTGCCTTGAACTAACCAAAAATTTATACCCCGAAAAATTCGATACAGTAA
ATCAGGAAATTGAGGACTTATTATCCCAACTAAGTTATATTCCATCAACACTTTTCATGT
CAGAAGTTCCATACATAGATTTTTTGGACAGAGTTCATGCATCAGAGCTAATACTTCGAT
CGAAAGGACTTTGGGATCTTCCACATCCATGGCTAAACCTTCTAGTCCCTAAAAGCAAAA
TACAACACTTTGCTAATGAAGTTTTTGGCAACATACTAAGTGATACCAACAATGGACCTG
TTCTTGTCTATCCAATTCATAAATCAAAGGTGGATAACAGGACTTCATTTGTTTGTCCAG
ATGAAGATATTATCTATCTTGTGGCCTTTTTATCCCATGCAAATCCTTCATCTAATGGAA
CTGACAGTTTACAACATGTTTTAACTCAGAACAAAAGAATTTTAGACTTCTGTGAGGTGT
CACACCTTGGAGTCAAGCAATATTTACCTCATTACACAACACAGGAACAATGGAGGACAC
ACTTTGGTCCAAAATGGGAAGTTTTTGTACAGAGGAAGTCTGTTTATGACCCTTTAGCTA
TGCTTGCTCCTGGACAGAATATTTTCCAAAAATCAGTATCAGTTTCATAACAAATGTTGT
TATTTGAAACTGATAGCAACGGCTAATTCTACGTTAGGTAAATATGCAGCACGATCGAAT
AGAAAATGAATACTACTTGGTTGTAGCCAATGTAAAATGTGAATAATAGCTATTAACTTC
ATATATTTCTTATGCCTTTTCTGCACATGTAAGTTTAAGAGAAGGCTAGCTAGATTCAGT
AGCACTTCAAGATATATAGATTATTAGGCAAAAAGAAGTAATGTATCAAGATGCAAAAGG
AAAAAAATATTGACTCAAATGTATGAATTCTTTAATTAATACTCATGGTATTGTA
