Microarray Probes on PGSC0003DMT400017300
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_52530_PI426222305 |
JHI_St_60k_v1 |
ACGCTAGTAAGTGTTCGTGAGACATCCGATAAAATTAGAACGATATAACCAAAAGCTAGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400017300
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400017300 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G16530.1 |
+3 |
3e-46 |
156 |
71/108 (66%) |
Auxin efflux carrier family protein | chr5:5400735-5402626 FORWARD LENGTH=351 |
Transcript Sequence (486 bp)
>PGSC0003DMT400017300 486 pgsc_dm_v3.4
GTGGAGTAGCCATGTTTAGTATGGGATTATTCATGGCTTTGCAAGGGAAAATAATTGCAT
GTGGAGCTGCATTGACAATTTATGCAATGATTTTGAGATTTGTTGTTGGACCAGCAACAA
TGGCACTTGGTTGTGTTGTATTGGGCTTGAGAGGAAATGTTTTACGTATCGCGATTATTC
AGGCTGCATTACCCCAAGCAGTGACATCTTTCGTATATGCTCAAGAATATGGACTTCATG
CTGATGTACTTAGCACTGCGGTGATTGTTGGCACCATAATTTCGTTACCTCTATTGATAG
CATATTATGCAATTTTGGATATTATGTCTTAAGATCCGACCATGAACTAACTAGATAGAC
GCTAGTAAGTGTTCGTGAGACATCCGATAAAATTAGAACGATATAACCAAAAGCTAGTAA
GAATGTTACTAATTAATGGGTACAACTTTGCTTGTAATTGTAAATTTGTAACAATTTTTG
TTATCT
