Microarray Probes on PGSC0003DMT400017286
Probe ID | Chip | Probe Sequence |
---|
CUST_52580_PI426222305 |
JHI_St_60k_v1 |
CATGATGGAATTAGAGAAGCAAGGGAAAATAGTACCATGGTGTTCACAACTTGAAGTCTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400017286
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400017286 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT4G15550.1 |
+2 |
1e-107 |
340 |
190/410 (46%) |
indole-3-acetate beta-D-glucosyltransferase | chr4:8877877-8879301 REVERSE LENGTH=474 |
Transcript Sequence (2290 bp)
>PGSC0003DMT400017286 2290 pgsc_dm_v3.4
CAATAATTAAGAGTCTTACAAGTCAATGATTTCTCTAACACAATACTAAAGTCTACTTTC
ATTCATTTGTCCTCGAACTTTGAACTTAGGTTCTATTTTTAAGTTTGTGAGTGTAAAAAT
GGTGCAACCCCATGTCCTCTTGGTGACATTTCCCGCACAAGGTCATATCAATCCATCTCT
TCAATTTGCCAAGAGGCTAATCAAAATGGGCATTGAGGTGACATTCACCACTAGCATTTT
CGCCCATCGTCGTATGGCGAAAACCGCGGCTTCCACCGCACCCAAGGGCTTAAACTTGGC
GGCATTCTCTGATGGATTTGATGATGGTTTCAAGTCTAACGTGGATGATTCTAAATGTTA
CATGTCGGAGATAAGAAGTCGTGGGTCTCAAACATTAAGGGATATCATTCTGAAGAGTTC
AGACGAGGGACGTCCTGTCACGTCCCTCGTCTACACTCTTCTGCTACCTTGGGCAGCTGA
GGTAGCGCGTGAACTCCACATTCCATCCGCGTTACTATGGATTCAACCAGCAACTGTGCT
AGACATATACTACTATTACTTCAATGGCTATGAGGATGAAATGAAGTGTAGCTCAAATGA
TCCAAATTGGAGTATCCAATTACCAAGGCTTCCATTACTAAAAAGCCAAGATCTTCCATC
CTTTTTAGTTTCATCTAGCTCTAAAGATGATAAGTATAGTTTTGCTCTACCAACATTTAA
AGAGCAACTAGACACATTAGATGGTGAAGAAAATCCAAAGGTACTTGTGAATACATTTGA
TGCATTAGAGCTAGAGCCACTCAAAGCTATTGAAAAATACAATTTAATTGGAATTGGACC
ATTGATTCCTTCATCATTCTTGGGTGGAAAAGATTCATTGGAATCTTCATTTGGTGGTGA
TCTTTTTCAAAAGTCAAATGATGACTACATAAAATGGTTAAGCACAAAGCGTAAATCATC
AATTGTTTATATCTCATTTGGGAGTCTATTGAATTTATCAAGAAACCAAAAGGAGGAGAT
TGCAAAAGGGTTGATAGAGATTAAAAGGCCATTCTTATGGGTAATAAGAGATCAAGAAAA
TATAAAAGAAGTAGAAAAAGAAGAAGAGAAATTAAGTTGCATGATGGAATTAGAGAAGCA
AGGGAAAATAGTACCATGGTGTTCACAACTTGAAGTCTTAACACATCCATCTTTAGGATG
TTTTGTCTCGCATTTTGGATGGAATTCAACTCTGGAGAGTTGTAGCTCAAATGATCCAAA
TTGGAGTATCCAATTACCAAGGCTTCCATTACTAAAAAGCCAAGATCTTCCATCCTTTTT
AGTTTCATCTAGCTCAAAAGATGATAAGTATAGTTTTGCTCTACCAACATTTAAAGAGCA
ACTAGACACATTAGATGGTGAAGAAAATCCAAAGGTACTTGTGAATACATTTGATGCATT
AGAGCTAGAGCCACTCAAAGCTATTGAAAAATACAATTTAATTGGAATTGGACCATTGAT
TCCTTCATCATTCTTGGGTGGAAAAGATTCATTGGAATCTTCATTTGGTGGTGATCTTTT
TCAAAAGTCAGATGATGACTACATGGAATGGTTAAACACAAAACCTAAATCATCAATTGT
TTATATCTCATTTGGGAGTCTATTAAATTTATCAAGAAACCAAAAGGAGGAGATTGCAAA
AGGGTTGATAGAGATTAAAAGGCCATTCTTATGGGTAATAAGAGATCAAGAAAATATAAA
AGAAGTAGAAAAAGAAGAAGAGAAATTAAGTTGCATGATGGAATTAGAGAAGCAAGGGAA
AATAGTACCATGGTGTTCACAACTTGAAGTCTTAACACATCCATCTTTAGGATGTTTTGT
CTCGCACTGTGGATGGAATTCGACTCTGGAGAGCCTGTCGTCAGGCGTACCTGTGGTGGC
ATTTCCTCATTGGACAGATCAAGGGACTAATGCAAAATTGATTGAAGATGTTTGGAAGAC
AGGTGTCAGGATGAGAGTGAGTGAAGATGGTGTGGTTGAGAGTGAAGAGATAAAAAGGTG
CATAGAAATTGTAATGGATGGTGGAGAAAAAGGAGAAGAAATGAGAAAGAATGCACAAAA
ATGGAAAGAATTGGCAAGAGAAGCTGTGAAAGAATGTGGATCTTCAGAAGTGAATCTAAA
AGCTTTTGTTCAAGAAGTTGGCAAAAGTTGTTGAAAAATTAAATTTCTTGATGAGAAATT
GTTTCCTAATTGTAATTTTCTTTTTTTTTTCACAATAAAATTTGGAGTTATATACATTGA
CCACGTAAAA