Microarray Probes on PGSC0003DMT400017167
Probe ID | Chip | Probe Sequence |
---|
CUST_52073_PI426222305 |
JHI_St_60k_v1 |
ATGGTTTGAGTGCCAGAGTTCAAATGCTACGTTGTAAGATTGAATCCCTCGTCGTTTTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400017167
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400017167 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT1G22160.1 |
+2 |
3e-31 |
115 |
64/127 (50%) |
Protein of unknown function (DUF581) | chr1:7823238-7823774 FORWARD LENGTH=147 |
Transcript Sequence (868 bp)
>PGSC0003DMT400017167 868 pgsc_dm_v3.4
TGACACTACTTCCTTCCCAAACAAAGCATCCTTCATAAATGCTTGACGTGGAAGCAGAAT
CAAACTAATTTTTTATCCATTAAAATAAAAACAGAGGATCAAACGGTTCAGATTCACTTT
ATATTTTTCCCCAATTCCAATTTCTTCTTCACTCCACTCTCCATACACGATGTTGGGGAA
AAGGGGCCGTCCACCGATGAGGAGGACAACAAGCATGACAGGGATCACCGTTGATCTTGG
TACTGCAACTGAATCGGAGCCGTCTGATTGTAATAAGCCTAAAATTATGGTTGATGAGAT
TAAGAGTTCGTCGGAGAAGGAAGGATTAATCATTAGTTCTGTGCCGGCGATGGTGTCGCC
AAGATACCAACGGAGAATCTCCGGCGAAGGTTTTGAGAGAGAAAGGGCTAATTTCCTGAG
AATTTGTGGCCTTTGTAACCGCCGATTGATTAATGGGCGAGATATCTACATGTACAGGGG
TGATACAGCATTTTGTAGTATGGAGTGTAGAGAAGAACAAATGAAGCAAGATGAAAGAAA
TGACAAGTCTAATATCAAGCCAGAAAATCATCACAATCACTCTGAATTTCGTTCTGCTAA
ATCTGAAGCTTCCAGCAATAACGACACCATTGCAGCAGCTTGAAGAACACACACAAAATG
AAAGAGAATAGGCATGCACAGTAGTGATGTGAGTTTTACTGGGTTGGGGACATTCGTGTA
AAATTTTAAGTATGTATTGTTATTTTACACAAACTTACACTAGGTGCCATGGTTTGAGTG
CCAGAGTTCAAATGCTACGTTGTAAGATTGAATCCCTCGTCGTTTTTTTTTTTTTTACTT
CGTTTCTTTTTATCTATTTATCTCTCTT