Microarray Probes on PGSC0003DMT400017159
Probe ID | Chip | Probe Sequence |
---|
CUST_51963_PI426222305 |
JHI_St_60k_v1 |
TTTGATAATGTTAGCTCAAACTCCGGGAGGCAAAGAGCGTTCGCAACACGAATTTCGATC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400017159
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400017159 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G54160.1 |
+1 |
6e-21 |
90 |
58/129 (45%) |
O-methyltransferase 1 | chr5:21982075-21984167 FORWARD LENGTH=363 |
Transcript Sequence (681 bp)
>PGSC0003DMT400017159 681 pgsc_dm_v3.4
ATGGCAAACATGAGTCAATTACCAATTAGTATTGGCTCAGACAAAGAGGGGAATTTTACA
TATGCAATGCAACTATTGTCATCATCAGTACTTCCCTTTGTGTTGCATTCAACAATTGAA
TTGGATGTATTTGAGATCTTAGCCAAAGCTAATGATACTCAACTTTCTTCTTCTCAAATT
GTTTCTAAAATGGCTTGCAACAACCCTATTGATGCAGCCAATATGTTAGACAGAATGCTT
TATGTGTTGGCTACATATTCTTTGCTCACTTGCTCCATTAATAATAATAATAATGGACTC
TATGGTCTGTCACCAGTGGGTAAGATGTTTGTTAGTGATAATGAAGATGGTGCATCTTTG
GGGCCACTCTTGGCTTTGCTTCAACATAAAGTATCCATTAACACCTGTCAGTGCGTGAAG
TTACTGAAGAACTGCTATAAAGCTACACCAGCAGAAAATGGGAAAGTGATAGTTGTTGAG
GCCATTCTACCAGTGAAACCTGATCATATCCATAGCTCTGTAGTTATTTCACAATTTGAT
TTGATAATGTTAGCTCAAACTCCGGGAGGCAAAGAGCGTTCGCAACACGAATTTCGATCC
CTCGCAACTGAAGCTGGATTTAATGGCATTAACTTTATATGTCGTGTCTCTAATTTTTGG
GTCATGGAATTCCACAAGTAG