Microarray Probes on PGSC0003DMT400017048
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_51229_PI426222305 |
JHI_St_60k_v1 |
TTTTTTGATGGACTCATGCCTCACAAAAGAAGAAGGCCGAAGAAGAGAGCTCAGAGACGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400017048
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400017048 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G11080.1 |
+1 |
1e-114 |
375 |
332/888 (37%) |
receptor like protein 35 | chr3:3470481-3473312 FORWARD LENGTH=943 |
Transcript Sequence (2634 bp)
>PGSC0003DMT400017048 2634 pgsc_dm_v3.4
ATGTCCAAAGAGTACTTTAGTTATTGGTCTGATGGAGATTCTTTCCCGAAAACAAAGTCT
TGGAATGAGAGTAGGGATTGCTGCAGTTGGGATGGAGTCACTTGTGACTTATTAAACGGT
CATGTTATCGGGTTAGACCTTAGTAGTAGTCTGCTTTGTGGAAGTATTCATCCCAATAGC
AGCCTCTTCCAACTTCATCATCTCCAAACACTAAACCTTTATAACAACCTCTTCAATTAT
TCTTCAATCCCACATAGCATTGGCCAATTGACGAATTTGAGGCATCTCAACCTTTCTCAT
TCTCACTTTGGTGGGAAAATCCCAACAGAAAACTCATACCTTTCTAATTTGGTTTTACTT
GATCTTTCTGTGTATGGATTACAACTTGATGAGAGAACATTTGAAACAATGCTTCACAAC
TTCACAAATCTGGAGGTACTAGCTCTCTCTCTTGGCGACATCTCATCACTGATACCTGTA
AGTATTCATCCCAATAGCAGCCTCTTCCAGCTTCATCATCTCCACACACTTAACCTTGAT
AACAATTACTTTTATCCTTCTTCGATCCCAAATGGCATTGGCCGATTGAGGAATTTGAGG
CATCTAAAACTCTCTGGCTTTGATGGGAAAATCCCAACAGAAATCTCATACCTTTCCAAT
TTGGTTTCACTTGATCTTTCTTATAGTTATAAATTCTTACAACTTGATGAGATAACATTT
GAAGCAATGCTTCACAACTTCACAAATCTGGAGATACTTTCTCTCTGGTATGTCAACATC
TCATCTCCGATACCTGTGAATATTTCTTCTTCCTTAAGATATGTGGATCTTGCACATACT
AATCTGCGAGGTGTTCTCACAGAGAGCTTTTTCCTTGTGCCAAACTTGGAAAGCCTCAAA
TTGAGTGGGAATGATCTTCTCAAAGGAGTTTTTCCAAAGATCCACCGGAGCAACACTCTG
TTAATGGAGTTGGATATTTCATCCACAGGCATCTCCGGTGAGCTGCCTGATTCAATTGGC
ACCTTTAGATTGACGAATAATTCCCTATCTGGCCCACTGCCTAGCAACCAAAGCATGCTT
CAAAAGCTAACCGAACTGAATTTGTCATACAACTCACTGAATGGTACCATACCTTCTTGG
GTGTTTAGCCTACCTTTGCTATCTTCAGTATCGCTCCAACATAACCGATTCAGAGGACTA
GCCGATGAAGTGATCAAAACAAACCCAACATTAAAAGAACTGCATTTAAGCAATAATCAC
CTCAGTGGTTCTTTTCCTCAATCACTTGTGAATCTCACAAACCTTGAAACCCTTGGAATT
TCATCAAATAACATCACCATTGATGAGGGCCACCTACCACAATTTCGTTACTATAACCTA
CAATATCTTGATCTGAAATTTAACTTCCTTCAGGGGTCACTACCTTTATCCATTTGTAAC
ATGAGGAAACTTATCTTATTAGATTTATCACACAACTACTTCAGTGACTCAGTTCCACAT
TGCTTGGGAATCATGGCTTCACTAACGGTGCTGAACTTAAGAAAGAACAACTTCACAGGT
AGTCTTCCTCCATTATGTGCACAGAGCACTTCATTGAGTACCATTGTCGTAAATGGCAAT
CGATTTGAAGGACCTGTTCCTGTGTCGTTGCTCAAGTGTGATAGACTAGAAGTCCTTGAT
GTGGGGAACAATGTTATAAATGACACATTTCCAGCTTGGCTCGGAACTCTTCAAGAGCTG
CAGGTCCTTATATTAAAGTCGAACAAGTTCCATGGACCTATAAGTACGTGTCAGACTAAG
TTTTGCTTTCCCAAGTTGCGAATTTTTGATCTTTCTCATAATGATTTTAGTGGCTCACTT
CCTGCAAAAGTTTTTGGAAACTTCAAGGCAATGATCAAATTAGATGGCGAAGATACAGGA
AATATCAAGTACATGGAATCTATGTCGAATTTGCCATTTGTCAGATCGTATGAAGATTCA
GTGAGTTTGGTAATCAAAGGGCAGGATATTGAGCTAGAAAGAATCAGCACAATTACGACA
ACCATCGATCTCTCAAACAACCATTTTGAAGGTGTCATTCCGAAAACACTAAAGGATCTC
AGCTCACTTTGGCTACTCAATTTATCCCATAACAATCTCATAGGTCATATACCAATGGAA
TTGGGGCAATTGAATACGCTTGAAGCTTTAGATCTCTCTTGGAATCGGCTCACTGGAAAG
ATTCCGCAGGAATTGACAAGGATGAACTTTCTGGCAGTTTTTAACCTCTCTCAAAATCAT
CTCATCGGACCAATTCCTCACGGTCTACAATTCAACACATTTGAAAATGACTCTTATGGC
GGCAACCTTGATTTATGTGGTCCTCCTTTATCAAAACAATGTGGAACGAGTGATTCATCA
CATGTTCCTCAACCATTGGAGTCTGAAGAAGATGAAGGTGAGACATATTTTTTTAGTGGA
TTTACGTGGGAATCAATAGTCATAGGCTATAGTTTTGGACTAGTTGTTGGAACTGTCATG
TGGAGTCTCATGTTTAAATATCGTAAGCCAAAATGGTTTGTGGAATTTTTTGATGGACTC
ATGCCTCACAAAAGAAGAAGGCCGAAGAAGAGAGCTCAGAGACGACGGACATAA
