Microarray Probes on PGSC0003DMT400017004
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_33818_PI426222305 |
JHI_St_60k_v1 |
GATATTTCCTCAATTACGACTCTGCATTGCCCATCTGTTTGGGAGAGTAGCTTACCAAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400017004
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400017004 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G10985.1 |
+1 |
8e-33 |
117 |
57/110 (52%) |
senescence associated gene 20 | chr3:3442776-3443108 FORWARD LENGTH=110 |
Transcript Sequence (642 bp)
>PGSC0003DMT400017004 642 pgsc_dm_v3.4
ATGTGCCCTTTAAACCTAAATACACCCTACTATTCACCTATAATTTCCAAACTACCCTTC
CAACGTCCCTATATATTCCCCACATCACACCTCTTTCTTCATTACCTACCATACCTTCTT
CTCTCATCCTTCATAGCTAATAATATCATCTTCTGTTTTACTGAACTGGCTAACTCTCAG
TTAACTCTGGAGGAAACAACAAACAAAGGGGTGGTGCTCGCCCTATATGAAGCCTTGAGC
TCACACGACGTCGTTCAGGTCCAGAAACTCCTGGCCTCCGACCTCGAGTGGTGGTTCCAT
GGTCCTCCTTCTCATCAATTTTTGATGCAAATACTCACCGGCACTGCTAAATTCGATAAC
GCCTCTTTTCAATTCCTTCATAAGACCATTGACGTATTCGGTTCCGTTGTTCTCGTCGAA
GGCTGTGACCCGACCCGATCTATTACTTGGGTTCACGCCTGGACTGTTACGGATGGGGTA
ATTACCCAGGTTAGGGAGTATTTCAATACCTCACTTACTGTCACCCGTTTTGGGAAATCG
GATATTTCCTCAATTACGACTCTGCATTGCCCATCTGTTTGGGAGAGTAGCTTACCAAAT
CGGGTCGGAAAATCTGTTCCGGGTCTTGTATTGGCTCTATAA
