Microarray Probes on PGSC0003DMT400016959
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_1712_PI426222305 |
JHI_St_60k_v1 |
ATTCACCCCTTCCAGAGCCATTCACTCCATTGAAGATTAAGAGGAGAAAAATTGAAAAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400016959
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400016959 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) |
Solyc02g014370.1 |
+3 |
7e-07 |
37 |
19/30 (63%) |
evidence_code:10F0H0E0IEG genomic_reference:SL2.50ch02 gene_region:7190824-7191120 transcript_region:SL2.50ch02:7190824..7191120- functional_description:Unknown Protein (AHRD V1) |
| TAIR PP10 | None | - | - | - | - | - |
Transcript Sequence (617 bp)
>PGSC0003DMT400016959 617 pgsc_dm_v3.4
TGAAATTTTTTTTAATTGTTTGCTACTATTTTGCTTTCTTCCAACAGATGATTCATCTAT
TGCAACAGATGGGTCATTTGTTGGTAATACAATATATACATAAATATTACAATAAGTATT
TTATCTATTATAATTTATGAATTAGTTTAAATATAAATTACTTTTGTATATAAATTGTGC
ATCCCTAACTTGTTCCCGTAGTAGCAATAGTTGCAAATGCCATTCTTTTTAACTCTAGGA
ATCATGGACACAAATCAGACCCTACGATGGATTTGATAAAAAGAGAATTGCTTGGAACAA
TAGGCATCAAAAGAGAGACACCTACTGGTGGTGCTGATGATGTTGCAACAGATGTTGATG
TTAATGTTAATATTCTGTTGATATTGGTGATACTGGTGATAAAAGTGGTGGTGAACATGT
TGATGATGTTGGTGGTATATATGGTGGATTCACCCCTTCCAGAGCCATTCACTCCATTGA
AGATTAAGAGGAGAAAAATTGAAAAAAAGGCTATTTTATATTTGATAGATTTTTAGTTAT
TTTATCATAAATTCTATTTTGTAAGTTGAAGAATTTGAAATGAATTGTAATTCATGAACA
TTTATCATATTTTGTTA
