Microarray Probes on PGSC0003DMT400016880
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_51295_PI426222305 |
JHI_St_60k_v1 |
GTGCTGGGACCATTTGTGTTGTATGAAACATTTTACCTTTTTACTTCTGCTTCTTTTGCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400016880
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400016880 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G28550.3 |
+1 |
2e-67 |
222 |
121/202 (60%) |
related to AP2.7 | chr2:12226168-12228251 REVERSE LENGTH=464 |
Transcript Sequence (1053 bp)
>PGSC0003DMT400016880 1053 pgsc_dm_v3.4
AAACAAGTATATTTGGGTATGGATATAGCTATTTTAACTATACAGTTTGCTTAATTTCGT
TGTTTCTGTGGATTTTGGTGCTAAAGCTGTGTCTATACTTTTTGCTAATTTTTGATTGGT
TTTTGTTGCTGCTTTATATTAGGTGGTTTTGATACTGCTCACACAGCAGCAAGAGCTTAT
GACAGAGCTGCAATTAAGTTCAGGGGTGTTGATGCTGATATCAACTTTAGCTTAAGTGAT
TACGAGGAGGATATGCAACAGATGAAAAACCTTGGTAAAGAAGAATTTGTGCACTTGCTG
CGACGCCATAGCACTGGTTTCTCAAGAGGGAGCTCCAAATTCAGAGGAGTGACGCTACAT
AAATGTGGTAGATGGGAGGCTCGGATGGGACAGTTCCTCGGGAAAAAGTATATATATCTT
GGGCTATTCGACAGCGAAGTAGAAGCTGCAAGGGCTTACGATAAAGCGGCAATTAAAACT
AGCGGAAGGGAGGCTGTTACCAACTTTGAGCCAAGTACCTATGAAGGGGAAACAATGTCT
TTACCACAGAGTGAAGGTAGCCAACATGATCTTGATCTGAACTTGAGGATATCAACCACT
TCTTCAAAGGAAAATGATAGGTTGGGAGGTTCTCGCTATCATCCTTATGATATGCAAGAC
GCAACCAAACCTAAGATGGATAAACCTGGTTCAGTAATAGTTGGAAGTTCACATCTCAAG
GGACTACCAATGATGTCCCAACAAGCTCAATTGTGGACTGGAATCTATTCTAATTTCTCT
TCCAGCTTTGAGGTAAAAGTCTAACTCTACCTTCAGTCAGAAATTTGGGGACAAATACAG
TGATGAAACTCCAATTTATCTCTGTTTAGTTTTCTTTTCCTCACTTATGGTCAAATTTGC
ATGTATTCAGTTGCCAAAATAGCCATATTCATGCCCCCTTCCCCCAATTTTCCTCAAGTG
CTGGGACCATTTGTGTTGTATGAAACATTTTACCTTTTTACTTCTGCTTCTTTTGCATTG
TCTTCAGTTGCCAAAATAGCCATCTTCATCCCC
