Microarray Probes on PGSC0003DMT400016722
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_39230_PI426222305 |
JHI_St_60k_v1 |
CTCAATTGTAGTGTTTCCTCATAACTCCCTCCATGTATTTTATATGTGTGTTGATGATCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400016722
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400016722 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G36430.1 |
+2 |
1e-47 |
174 |
124/419 (30%) |
Plant protein of unknown function (DUF247) | chr2:15290211-15291557 FORWARD LENGTH=448 |
Transcript Sequence (1936 bp)
>PGSC0003DMT400016722 1936 pgsc_dm_v3.4
ATTTTGTAAAATTTCAGAAAAATATATTATTTTGATAAACTGTTTTAAATAATGGCTTAT
TTCGTTCAAAATTTCTTTAAAAAACAAACAACTTTCTTTTGTAGGACTTATAGTTGAAGA
AAGAAGTATGGCAGATCACTCCATTGAGATTACCCCAATAGATGACCAAATTCCACTGCT
TCCTCAAACTAAAAAAGATGAGGTCTCTCTCAACTATATAAATTTATTTTTTTATTTCAT
TAACACACTTTTCTTTTGACAATTAAATGTATAATCTTTTTCTATATACGTGCATGAATT
TCAAGAGATTTGGAGGGGTAATGCATAAGGTGTGGTAATTTTTTAAAGTCACGTGACATT
TTTAAAATTAAAAAATTAGTTCTATATTTTTTTTAATTCACTCTATTAACAAAAGGGGTA
AATATGCATCATTTATAAAACAATGAAATGCATTACTTTTTTTTTTACGAAATATATATT
TGATCTAGACCGCAAAGTTAAGAAGGGTATACTTGCCTCTTCTCCGTTACAGATAGAAGA
AGGGAGGAAAGTGGATCATTTAATCGACAAAAATGAAAGAATTGATGAAATGTTTGAGGA
TTTAGACAATTCATCTATTAAATCATGTACGATATTCAAAGTGAATGTGTGGCAACGTGA
ATCAAATTCAGATGCTTATACACCAAAGATGGTCTCCATTGGTCCTTATCATAAGAAGAA
TACTAAACTTGGTCCAATGAAAAAGAACAAACTATTATACCTACGAAGGTTTCTTCAACG
AAATAAGAGACTTGATGTGAAAAGTTACATCAATGAATTGGAGAAAGTGAAGGAGGAAGT
ACTGAAGTGTTACAAAGATATAGAAAAGCTTGGTAATGATATTAGTCATGAATTTTCCGA
AATGTTGTTGTTTGACGGTTATTTTGTGGTTGAGTTTATTCGAGAGTACTGTTGTGGAAT
ATATCCAAAAGTAGAAGACAAGATTATTAATATTAATCATAATTACATATTCCGAGACTT
GATGTTACTAGAAAATCAATTTCCTTTCTTTGTCCTCGACAAGCTCCATGACATGACAAA
GCAAGATGATGATTTACCATTGGCAACACTGGTGAATAAGGTGTTTACCTTTTTTGTTAA
CTGGCCAAAAATGACCCTTGAATCCTTTGGAAAGATAGAATGTAATGCAGAAAATGTCAA
ACATTTACTTCATGTAGTACACATATTTTCAAGTCATGGGAATCCCATGAAAAACTCAGA
AGATTGCTTAACGAGTCCTACGGTCATGCCAAATGCAACAGAGCTTTCCGAAGCCGGAGT
TAGCTATGCAAAGGTCAGAAATATGACAAGTTTATTTGATATAAAGTTCGAGAATGGATT
GATGCCAATCCCTTATTTTCTAGTCGTAGATGGTACAGAAACTCTCCTGAGAAATTTCAT
TGCTTATGAGCAACAATCACCTGATGTATATCCTACATATTTTAGCGATTATGCAACTTT
CATGGATCATCTTATCGACTCAGACAAAGATGTGGGTTTGCTTTGCTAGAAAGGAATCAT
AGAGAACTGGATAGGAGAGGACAAAGAAGTTGCTAGCCTCTTCAACAAAATCGGAAAAGG
GGTCACTACGTATTTCAACTTCTATTACACAGAAGAAATCAAAAAAGCAATTGAATATCG
TGAAAAACCATGGAATAGAATGAAGGCAAATTTAATGCGCAATTATTTTAGTAGTCCTTG
GGTAGGAGCTTCAACTGTGGCAGCCATTATACTCCTAATACTCACAGCTATACAAACTAT
TTTAACTTTCACAGGTCCTCTTAAGAAGTATGTACTAGTAATTATCTCAATTGTAGTGTT
TCCTCATAACTCCCTCCATGTATTTTATATGTGTGTTGATGATCTTATTATGAGTTCTTC
ATTAATTCTATGTCCC
