Microarray Probes on PGSC0003DMT400016585
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_9770_PI426222305 |
JHI_St_60k_v1 |
CGCAAAATTGGTCTCAAAATAATGGCTTCCATCATAATTTTATGAGACCTTCTTGACCAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400016585
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400016585 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G36920.1 |
+3 |
3e-118 |
362 |
252/503 (50%) |
Integrase-type DNA-binding superfamily protein | chr4:17400998-17403140 FORWARD LENGTH=432 |
Transcript Sequence (1850 bp)
>PGSC0003DMT400016585 1850 pgsc_dm_v3.4
AAATAGGTGAAATAGCACAAACAAGATCTAGTAAAATACTAAGTAGACATCACATATCCA
TCATCTCTCTTTTCTTTTTTTTTATAAAATAAAACTTTCCCCAACAACTTCAACTTCTCT
ATAAGTTATAAGTTCCATCTCCTTTCAATATTTACACAAAAAAAAGTTCATTTTTTTTCT
TCATTTCACACATCAATATAGGTCACGTTGCAACTAAAAATCTACAACTTTTCGAAAATA
GACTCATTTTGGTTCTATCGACAAACCCATTTTATTATACAACAAAAAAAATGTGGAATT
TAAATGATTCCCCCGATCAAATAATGGAGGATGAATCTGATGAAGGTATACCGGTGAGAT
CGGTATCAAATTCAAGTTCATCCGCTGTACTTGTTGCAGAGGACGGTAATTCATCAGAAG
AAGACGGTGAAAGAGGTAAAAAAAAGAAAAGTAGTACACCAGGTAAATTATTCGGTTTTT
CTGTTAACGACGACAATTTGGAACCGCCGATAGTTACCCGGCAATTTTTCCCGGTGGATA
ATGAGTCCACCAATTTTCCAAGAGCACAATGGGCTGGAATTAAATTTTGTGAATCGGAAC
CGCCACTTGTCACCGGATTAGTGGGTAACCCAATTGAGGTGTCACAACAACAGCCAATTA
AAAAAAGCCGCCGTGGACCACGTTCAAGAAGTTCACAGTACCGTGGTGTTACCTTTTACC
GGAGGACTGGCCGGTGGGAATCGCATATATGGGATTGTGGGAAACAAGTTTATTTAGGTG
GATTTGATACAGCACATGCAGCAGCGCGTGCATATGATAGGGCAGCAATCAAGTTCCGGG
GAGCGGAGGCGGACATAAACTTTACCTTGGAGGATTACGAAGGTGACTTAAAACAGATGA
GCAATTTAACCAAGGAAGAATTTGTGCATGTACTAAGGAGACAAAGTACTGGTTTTCCAA
GAGGAAGTTCCAAGTATAGAGGAGTCACTTTGCATAAATGTGGTAGATGGGAAGCTAGAA
TGGGACAATTCTTAGGCAAAAAGTATGTTTATTTAGGCCTATTTGATACTGAAGTTGAAG
CTGCCAGATCTTATGATAAAGCTGCTATCAAGTGTAATGGAAAAGATGCAGTTACCAACT
TTGATCCTAGCATTTATGAAAATGAAGTTAACTCAACCGAATGTAGTGATAATGCAGCGG
ACCACAATCTTGACTTAAGCTTAGGAGGTTCAAGCCAAGAAATGGGGGACAATAGGGGTC
AAAATTCTTCATCTAATTTGCAATTGGATGTCCATTGGGGCCACCAAGGGTCATCAAGGC
TTAATAAGCCACGTAGCCAAATCAATTTTGATGGCCAAAAAAGAAGTGGATATAATGAGA
CTGAAACATTGCAACTCTTGAGCCAAACGCACCTTAATTCGTCAGGCAGAGTGCAACCAA
ATATTAATGAAATGCAAAAGTTTGGCGAATTTATTAGAGATGGTGAAACACATATGGTTC
AAGCCTATCCCCGGCAATTCAATTCATATCAAGTTCAGACTTCGAGCAACAATAATGTAG
GCCAAATTGGGGCAACAAGTAATTCTCAAGAATGGCACCCTAATTATGAGATAATTACAA
CTGCTGCAGCATCATCAGGATTCCCCCAGCAGATAATAAGAACGCAAAATTGGTCTCAAA
ATAATGGCTTCCATCATAATTTTATGAGACCTTCTTGACCATTAATTAATTTCTTCATGT
TCTTTTATTAATCTTTGTAAAGAGAAATTAATTAATGTTGAGATTATTAATACTCTCAAA
ACATAAACAAACAGATTATATTGGCAGTATATATATGTTGGAATGAAATT
