Microarray Probes on PGSC0003DMT400016405
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_46422_PI426222305 |
JHI_St_60k_v1 |
TTGGTGACTGACTTTTTGAATATTTTTGGGCAGGCATTTAGGGGAGAATGCTCAGATGGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400016405
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400016405 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G09430.1 |
+1 |
1e-108 |
327 |
155/277 (56%) |
alpha/beta-Hydrolases superfamily protein | chr5:2932162-2933362 FORWARD LENGTH=311 |
Transcript Sequence (1371 bp)
>PGSC0003DMT400016405 1371 pgsc_dm_v3.4
CCACTTTCCATTTTCTCCCTTTTTCTTCATTACAATTCCCCATAAACCTCTAATTTTTCT
TCTCAAACTCTGATAACACACACAAAACTTTGTAATTTGCATTTTCCAGTGATGCCCAAG
TGCTTTAGCTTCACCGCAACTCAAAACCGGTGCCTCAAATCCACTTTCAGCAGCCGTGGA
CTCCGATCTACTTTCACTGACCTCAAAGATGGTACCATCATGCATTGCTGGGTACCCAAA
TCCAAAAAACCGACCCGACCCGATTTGGTCCTAATCCACGGTTTCGGAGCCAATTCCATG
TGGCAATGGAGCGAAACGGTTCGGATCCTTTCCCGTCACTTCAACGTCTACGTCCCGGAC
TTACTCTTCTTCGGCGACTCGTACACCACTCGGCCGGAACGGACTGTGTCGTTTCAAGCT
CAGTGTGTGAAGCGAGTTATGGAGGCGAACTCGGTGACGAAGATGAGCGTTGTAGGGCTG
AGCTACGGCGGGTTTGTGGCGTATGATTTCGCGGCGCAATTTGGGGATTGTGTTGAAAAA
GTGGTGATTTGCTGCGCGGGAGTTTGTTTGGAGGAGAAGGATTTGAAGGAAGGGTTGTTT
GCGGTGAGTAGTGTGGAGGATGCAGCCAATATTTTGCTGCCGCAGACGGCGGAGCAAATG
AGAGAGCTTATGGGTTACACGTTTGTTAAAGCTCCGGCCAAAGTGTTGCCGTCTTGCTTG
CTTACTGACTTCATTGATGAAATGTTTACACAGTATGTAGAGGAGAAGAAAGAATTGCTT
CTTGCAATTGCTAAAGACAGAAAACTTTCTGATCTACCTAAGATCACTCAGCCAACATTA
ATAGTGTGGGGAGATCAAGACAAAATATTTCCTTTAGAACTAGGCCACAGATTGAAAAGG
TTCATTTCCCCAACTGGGTTAATTGAAATTTTGATATACACTTGTCAAAATATTTACATC
CCTTAGCTCGATAGACATAATTATACATGTCTACACTCATACATCTCGATTAGTTTTGTT
GGATATATTGTGTGATAGAATCATGCTTGGTGACTGACTTTTTGAATATTTTTGGGCAGG
CATTTAGGGGAGAATGCTCAGATGGTAGTCATTAAGAATACAGGCCATGGTTTTCTTTAT
GAGAAACCAAAAGATTTCCATAAGCCTTTGAAAGCATTTCTCTTGGGTACCACAAAAACT
GCTCCTCCTCAGGACCAAACATGATTCACTTGCTGCCTACCATAATGTAACTTGGTCATA
ATGTATCATCTCCATTTTTTGCTATTTAATTCATGTATTATTGCTCTACCACCATCCTAA
GAAATATTTTAACTACTATTATAAAAGAATTTTAACAACTACCATAGTTGC
