Microarray Probes on PGSC0003DMT400016258

Probe IDChipProbe Sequence
CUST_16447_PI426222305 JHI_St_60k_v1 TTTCACATCTTACCCTTGCTTAGCAACACTTCAGTGTCGTCATCAAGTCTCTAAGACATA

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400016258

Click here to view details at Spud DB Genome Browser (opens in new window)


Source Transcript PGSC0003DMT400016258 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT1G07530.1 +1 0.0 632 352/698 (50%) SCARECROW-like 14 | chr1:2313828-2316137 REVERSE LENGTH=769

Transcript Sequence (2854 bp)

>PGSC0003DMT400016258 2854 pgsc_dm_v3.4
GAATAAATGGTCATGGATAGTAGAAACTATAAGGGGTTATATGATGCAACATCTGGAATT
CAATTAAAGGATGACGATGATGATAAGCCATTTTTTCAAGATCTGAATCTGATTAATCAT
CTTAGAGTTAGTGATGCTTTAGTTGAACGAAATCTAGAACCCGTTGATTTCGTTCCATCA
GCTATGGATAACTGTCATGAGGATTATGATTTTAGTGATGTAGTGCTTAAGTATATTAGC
CAAATGCTTATGGAAGAGAATATTGAAGAGAAGACATGTATGTTTCAAGAATCTGCAGCT
CTTCAAGCTGCTGAAAGATCGTTTTACGAAGTTATTGGAGAGAAGTACCCTCCGTCTCCC
ATTCTTGATTTAGGTCAGGATGGACGTTGCGGTGTGGACTCTAGTAGTAATAATTACTAT
AGTTGTGGAAGTGATATTACTGATGGCTTACTATGCCCAAATTGGAATCCTGATCTTGGT
GATGTGGACTCTTCACATACTCAACAATTTGTGATTGATTCTGGGACTTCTCAGTCATCG
CTCAGTTCGCCAAGTAGCTCCGGAACTGTCACTGATGCACATGTGGATTCGCCTGTGAGC
TCAATTCAGATTCCGGACATATTTAGTGATAGTGAGTCGATCATGCAGTTTAAGAAAGGT
GTCGAGGAAGCAAGTAAGTTCCTTCCTACAGGCAATAGTTTGCTCCTTGATGTAAGGTAT
GATGTAGTGGTGAAGGAGGATAATGAAAACGGAAAAGATGCAGTGGAGAATCGTGGGAAA
CAGAAATCTCCCGAAGGATCGAGAGGGAAGAAAAACATTCATCATGATGATGTTGATGTT
ATGGAAGAGAGAAGTAACAAGCAATCTGCAGTTTTCTATGAATCAACTGTTCGATCAGAT
TTGTTTGATAAAGTGTTGCTATGCAGTGGAGGGAAAAATGAATCTGCTCTTCGTGAGTCC
TGGCAGGTGGTATCAAGTAAACATGCTCCAGAGAACGTCCTTCCAAAGGGATCTAACAGT
AGGAAGTCCCGCGGAAAGAAACAGGGGGGTAAAAGAGATGCAGTAGACTTAAGAACCATC
TTGACACTTTGTGCACAAGCTGTTGCTGCGGATGATCGAAGGACAGCAAATGAGTTTCTG
AAGCAGATTAGGCAGAATTCTTCTCCGACGGGGGATGGGATGCAGAGGGTGGCCCATTAT
TTCGCCAATGGTCTTGAGGCACGGATGGCTGGTTCTGGTACTCAGATTTATACCGATTTT
ATTTCGATGCCTACATCAGCAGCTAATATCTTAAAAGCTTACCAGCTATTTCTTGCTGCC
TGCCCATTTAGAAAACTCTTTAACTTCTTCTCAAATAAAACAATTATGAATGTAGCTGAA
ACGGCATCAACAGTGCATATCATAGATTTTGGTATTATGTATGGCTTCCAGTGGCCCTGC
TTCATACAACGTCTCTCTCGTAGACCAGGTGGACCTCCCAAGCTCCGGATAACTGGGATA
GACTTTCCGAATCCTGGTTTCCGACCAGCAGAGAGGGTTGAGGAAACGGGGAGGAGGTTA
GCTGATTATGCTGAGAGTTTCAATGTTCCATTTGAGTTCATAGCTATAGCACAGAAGTGG
GAGACAATTAAAGTGGAGGATCTTAAGATCCAGAAGGATGAGGTTCTTGCAGTAAACTGC
ATGTATCGGTTCAGGAATCTACTCGATGAGACTGTGGTGGTAAATAGTCCTCGGGATATT
GTATTGAATCTCATCCGGAAGTTAAATCCTGATGTTTACGTACAGGGGATCGTAAACGGT
GCTTATAATGCTCCTTTCTTTATCACACGATTCCGGGAGGCACTTTTTCATTACTCGTCA
GTGTTTGATATGCTTGAAGCTAACATTCCCCGTGAAATTCCTGAGAGATTGCTGGTTGAA
AAGTTAATATTTGGCAGGGAGGCAATGAATGTTGTAGCGTGTGAAGCTGCTGAGAGGATT
GAGAGACCAGAAACATATAAACAATGGCAGGTCAGAAATATAAGGGCTGGTTTTAGGCAG
CTTCCTTTGAACGAGGAGATCTTGAGGGTGGCAAAAGATCGTGTAAAGGCGTACCACAAG
GATTTCGTGATTGATGTAGACGGTAAGTGGCTACTGCAGGGATGGAAAGGTCGTATCATG
TATGCAGCTTCAACCTGGAAGGGATCTCTTTGAATCTCTTCTGATTACTCGTGAAGGAGC
AAGTTCATCCGCAAGGCTTTGCCCCTGCCCCTCAACAGTGAAATCGTGTATGGTGCTGGC
CCTTCTGAAGGACAAAGACAACTTTGCATGGACTTGATTATAGCATAAATGTAATTGGTA
CCAACGCAAAGGTTATGTCATGGCTCTGGACAAGGATAAGCGGGAGCAGAACTTGGAATT
TGCTTCCTCATCTTCTCCATTGCAATAACTCGGTAGTGTTCGTTGTCAATGTAGCTGTTA
ACTGACAAAATAGCCCGGTAACAAAACCTTTTCCCCAGAACTTATTTTTCTCCGGACATG
TGAAAAAGTGTGAGCCGATAGGCGATTAAATTGATCGTATGGCATGAAAGGCCTACTCCT
TCATTTGTATTTTACATCTGTGATTGACTACGCCTAAAGTAATAGCAGTCAAAATGATCA
CTGAAGAATTTCCATAGGTATATCACTACTAATGCGTATATTGTGCAATTTCACATCTTA
CCCTTGCTTAGCAACACTTCAGTGTCGTCATCAAGTCTCTAAGACATACTTTTTCTTGCC
GTTTGTGTAGTTCTTGAAAGACAACTTAACAATTGATATTTCATTTTATTTGTGATTCCT
TTTCAATTTCCTTGCCCATATATTTTGTTATTCG