Microarray Probes on PGSC0003DMT400015952
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_27823_PI426222305 |
JHI_St_60k_v1 |
CAACAAGCTTACATGAACTACTAGCTGACTTTCAATTGCTGCTTTTTCCTCTTCTTAATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400015952
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400015952 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G05640.1 |
+1 |
4e-61 |
185 |
87/130 (67%) |
Protein phosphatase 2C family protein | chr3:1640610-1642227 REVERSE LENGTH=358 |
Transcript Sequence (918 bp)
>PGSC0003DMT400015952 918 pgsc_dm_v3.4
CTGAAAACTTGGTACTTCAGGGTGATCTACTGGTAGTAGCAAACGTTGGAGATTCTCGAG
CTGTATTAGCAACAACAGATGATGATGGTAGATTAGTATCAGTTCAGCTCACCGTTGACC
TCAAACCTAACTTACCTCGTCAGTTTTCTTCCATGTTTCACATAATATTGAGTTTCATGA
GCATTTTTCGAAAAGAGTAAATATGTTAATGATTACATTACAGGGGAAAGCGAGCGAATA
ATGCAGTCAAGAGGGAGAGTGTTGTCATGTGAAGATGAACCAGGGGTGTATAGAATGTGG
ATGCCTACAGTCGAAGGGCCTGGATTAGCAATATCAAGAGCCTTTGGTGATTACTACATA
AAGGACTTTGGCCTTATTTCAGAACCAGAATTGACATCCAGAAACATAACACATAGAGAT
CAGTTTGCCATCTTGGCAACAGATGGGGTTTGGGATGTGATGTCAAATGAAGAAGCAGTG
GAGATAGTATTTTCAACTGAAGAAAGGGAAGATGCAGCTAAGAGGCTGGTGGAAAGTGCT
ATTTGTGCGTGGAAACGCAAACGAAGGGGCGTTCCCATGGATGATATCTCAGCAATATGC
CTCTTCTTTCATAACATTCCTCCTTCAAAACAACAAGCTAAGAATGTCTAAAATTCAACA
ACAAGCTTACATGAACTACTAGCTGACTTTCAATTGCTGCTTTTTCCTCTTCTTAATATT
TTTTTCAGTACTTGATGGTTTGTACATAAGTTCATACATACATATATAGGCTCTTCATGT
TTGCTATTATATTTCAATCAGGCATTGAAATGAAATATATTGAAAATCAAATCAGCTTCA
AAGTTGAGGAATATGCTTAATATCTGTTTTCCAGAGATATTGTCAATATTATGGTGCAAA
CTTTAAAATGCAAAAAAG
