Microarray Probes on PGSC0003DMT400015933
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_27864_PI426222305 |
JHI_St_60k_v1 |
CGAGTTGTGTCATTGAGATAGCATTGGATACTTTCTGCTAGGAGTAGAAATTTTAATTCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400015933
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400015933 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G09530.1 |
+1 |
1e-07 |
53 |
33/86 (38%) |
hydroxyproline-rich glycoprotein family protein | chr5:2960080-2961192 REVERSE LENGTH=370 |
Transcript Sequence (1084 bp)
>PGSC0003DMT400015933 1084 pgsc_dm_v3.4
CTTTAATCTTCTAAGATTTGCAGATAAATGGCTCAACATTACCACTTATCTTCTCTTTCA
CTACTTACATTTCTCAATTTATTCTTCATTTATGGCAACATAACTGGAGCAACTGCACGA
CACCTTCTAGGGACGCCCCTCCCTGAGATACCTAAACCAGAACTCCCCAAAGTGCCAGCG
TTGCCAAAGCCTGAAATCCCAACTGTGCCGAAACCTGAGTTTCCAACCATACCAAAGCCT
GAGATACCAACTTTCCCGAAGCCCCAATTACCAACTTTGCCAAAGCCTAAGATGCCTGAG
ATTCCCCCAATGCCAAAACTAGAGTTTCCTCCCTTGAAAAAGTCAGAAATCCCAGCAGTG
CCAAAGACTGAGGTTCCTCCGGCTATGAAAAAACCTGAAGTTCCAACTTTACCGAAGCCC
GAGCTACCGAGTGTGCCAAAGCCAGAAATTCCAAAACTACCAAAGCCAAAGGTCCTAGAA
CTTCCAAAGCCAGAAGTACCAACTATGCCGAAGCCTAAAATCCCAGAATTACCAAAGCCA
AAAGCCCCCAAGCTTCCAAAGCAAAAAGTCCCAACAATGCCAAAGCCAGAAGAACTAACT
ATGCCAAACAATGAAATCCCAAAACTACCAAAGCCTGAAGTACCAAAAATGCCAATGCCT
GAAATCCCAGAAGTACCAAAGCCAAAAGTCCCAGAACTTCCGAAGCTAGAAGTACCAACT
ATCCCAAAGCCTGAAATCCCAGAACTACCAAAGCCAAAAGTCTCTGAGCTTCCAAAGCTA
AAAGTTCCAACAATGCCAAAGCCTGAAATTCCAGAACTGCCTAAACCAACTCTTCCTTCA
CTTTCTCCACCATACAAACCCGCTACTCCTTGAGTAAATTATATGCTACTTTCATTCTAT
AAGAAAGTACCCAACTGATGTTTTGAGATTTCCATCTCAGTCTATGAAATTTGCCACCCG
AGTTGTGTCATTGAGATAGCATTGGATACTTTCTGCTAGGAGTAGAAATTTTAATTCTTT
TATAATAGTTTTTGAATTGGATGTACCGAGTTTGTCGTGTTATTATAATATATGAGTGTT
TTAT
