Microarray Probes on PGSC0003DMT400015675
Probe ID | Chip | Probe Sequence |
---|
CUST_42949_PI426222305 |
JHI_St_60k_v1 |
GGAGTCTCAAACTCGAGTCCTATTCAAACACAAAATTGTGTTTATTTCTGGCGTAAATTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400015675
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400015675 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G48170.1 |
+1 |
7e-41 |
141 |
82/161 (51%) |
F-box family protein | chr5:19532729-19533202 REVERSE LENGTH=157 |
Transcript Sequence (804 bp)
>PGSC0003DMT400015675 804 pgsc_dm_v3.4
AAAAAAGTCAAAATCCTTTACACTCTCGATTTCTTCTCTACAAATAGGCATTACTTCTCT
CTTTACTTCCTTATCTCAACCTTTAACTAACCATTACATTCCTGAAAATTTGTGTGAACA
ATGGGTACCAATTTTTTCATCAATGATAATGAGGATGTGTTGATTGAGATATTGAAGAGG
CTCGACGGCCGTTCATTGGGAGTAGCTGCCTGTGTATGTAAGCTCTGGTGCGGTATCGCT
CGGAACGATTCTCTCTGGGAGCATCTCTGCTTCCGCCACGTGTCGCCGCCGCTGGAAGGT
GTGAGGACGGTGGTTTTGGCGCTCGGAGGGTACCGGCGGCTGTATATGGTCTGCGTGAGG
CCAGTGTTGAATCGATTGCGAAAATGGAGGCCGATTGGAATGGAATCTGATTCGGAGATT
GTGAGGCGAGTTTATTGGACTCGTCATGAAGTCGAGTTATCGTTGTCGCTGTTTTGTGTG
GATTATTATGAGAGAGTATTGTTGAGCGGCGGTAGTGGTGATGGTGGCGGCGGAGGAAAA
CACGGCGGGGGAGACGCTGCGGCGGCGCCGTGTGTATCGTCGCTTATGTTCCTTTGTAAG
GCTGTGAATGTTTGAATGAAATTGAATTGAATTTCAAATTAAATTCGGAGATGAAACTTA
TTTGACGAGACCAACGAGGATTTGTAGTAGAGTGGTAAGTACTCGTTCATACTTAATTAG
GAGTCTCAAACTCGAGTCCTATTCAAACACAAAATTGTGTTTATTTCTGGCGTAAATTCG
AATTTTGTTACACTCCGAATACAG