Microarray Probes on PGSC0003DMT400015292
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38771_PI426222305 |
JHI_St_60k_v1 |
AATGTGGCGCTTATCGCGATAAATATATGCACTAATTGGGATAAGGAGAAATCGCCAGCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400015292
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400015292 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G52450.1 |
+1 |
1e-112 |
342 |
166/277 (60%) |
MATE efflux family protein | chr5:21289042-21291749 REVERSE LENGTH=486 |
Transcript Sequence (1245 bp)
>PGSC0003DMT400015292 1245 pgsc_dm_v3.4
ATGGAAGGTCTACAAGTTCCATTATTGTCAAATCAAGAAACAAACCATGATTTTGATACT
ATTACTACTAACAATGAACAAGAATATTGTAGAGGAGAAATCATTGAAGAAATAAAGAGG
CAATTAGGACTTGCTGTCCCTCTTATAGCAGTTAATATTCTGCAATATTGTCTTCAAGTT
ATTAGCATCATGTTTGTTGGACATTTGGGTGAATTGCCTCTCTCTGGTGCTTCTATGGCT
ACTTCTTTTGCTTCAGTCACTGGATTCAGTGTTTTGATTGTTCTTGGAATCAAGGGAGCT
GCTTTGGCTAATGCCATTTCGTATTGGATTAACGTGTTTTTATTAGCTGGTTATGTTAAA
TTTTCCCCGGCTTGTAGAAAAACTTGGACTGGTTTTTCGAAGGAAGCTTTAGACGACATT
CTGGATTTTATCAAGCTTGCCATTCCTTCTGCTGTTATGATCTGTTTCGAATATTGGTCA
TTTGAGATGGTTGTTCTGTTATCTGGCCTTCTCCCTAATCCTAAATTAGAGACATCAGTG
TTATCGATAAGTCTCAATACTTGTTGGATGGTGTACATGGTTTCAGTTGGACTTGGTGGT
GCTATAAGCACAAGAGTTTCAAATGAATTGGGGGCTGGTCGTCCACAAGGAGCACGATTA
GCTTTACATGTAGTCGTGATAGTGGCCATCTCAGTAGGATTGATAATCGCGACCACCACC
ATTTTGGTTCGTTTTGTGTGGGGGAAGCTATACAGCAACGAAGAAGAAGTGATCAAATAC
GTTGCCAAGATATTGCCTCTGCTTGCTTTATCTGATTTCTTGGATGGCTTCCAATGTGTG
CTATCAGGGGCTGCTAGAGGATGTGGATGGCAAAAACTCTGTGCATTTATCAATCTTGGA
GCTTATTATGTTGTGGGATTACCTTCTTCTGTTCTCTTTGCATTCGTTTTCGATACTGGA
GGCATGGGACTATGGATGGGGATCATTTGTGCATTGCTGGTGCAAAATGTGGCGCTTATC
GCGATAAATATATGCACTAATTGGGATAAGGAGAAATCGCCAGCTATGGCAGCAAACAAA
GATGATTTACAAAGTGACTATAGATTCTTCAGTTCGAAACCGAAAGTAGATTTGAGGAAG
CTGAGGCCAATGATTCTGAAAAGGATTGAGGATCGGGCGAAAGATTATCCAGTAAAATCC
CTCCTCTGTTCTAGCCCTATTGTCGTCATTTTTGAAGTTCTTTAA
