Microarray Probes on PGSC0003DMT400015250
Probe ID | Chip | Probe Sequence |
---|
CUST_40113_PI426222305 |
JHI_St_60k_v1 |
CTATTATGCTTGTGTGAAATAAAGCCAGTTGTTTGGCATGCAATTACTGTTATGTTTGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400015250
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400015250 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G12490.2 |
+2 |
1e-24 |
105 |
69/182 (38%) |
cystatin B | chr3:3960523-3961876 REVERSE LENGTH=234 |
Transcript Sequence (2643 bp)
>PGSC0003DMT400015250 2643 pgsc_dm_v3.4
AAAAATATTCCTTCTTCTTAATTAAGTTATTAATTATTCGCAGTGATGGCAATCGTAGGA
GGCCTTGTCGATGTTCCATTCGAAAACAAAGTCGAGTTTGATGATCTTGCTCGTTTTGCT
GTCCAAGATTACAATCAGAAAAATGATTCTAGTTTGGAGTTTAAAAAGGTTTTGAACGTG
AAGCAACAAATAGTTGCTGGAATAATGTACTATATAACATTTGAGGCAACTGAAGGTGGA
AACAAGAAAGAATATGAAGCCAAGATTTTGCTGAGGAAATGGGAGGACTTGAAGAAAGTT
GTAGGATTCAAGCTTGTTGGTGATGATAGTACAATGCCTGGGGGCATTGTCAATGTTCCA
AACCCAAACAACACCAAGTTTCAAGAACTTGCTCGTTTTGCTATTCAGGATTATAATAAA
AAACAGAATGCTCATTTGGAGTTTGTAGAAAATTTGAATGTTAAAGAGCAAGTTGTTGCT
GGAATCATGTACTATATAACACTTGCGGCAACTGATGATGCTGGAAAGAAGAAAATATAC
AAAAAGGTTTTGAACGTGAAGCAACAAATAGTTGCTGGAATAATGTACTATATAACACTT
GCGGCAATTGATGCTGGAAAGAAGAAAATATATGAAGCTAAGATTTGGGTGAAAGAATGG
GAGGACTTCAAGAAAGTTGTAGAATTCAAGCTTGTTGGTGATGATATTGCAAAACTTGGG
GGCATTACTGATGTTCCATTCCCAAATAACCCCGAGTTCCAAGATCTTGCTCGTTTTGCT
ATTCAAGTTTATAATAAGAAAGAGAATGTTCATTTGGAGTTTGTAGAAAATTTGAACGTT
AAACAACAAGTTGTTGCTGGAATGATGTACTATATAACACTTGCGGCAATTGATGCTGGA
AAGAAGAAAATATATGAAACTAAGATTTGGGTGAAAGAATGGGAGGACTTCAAGAAAGTT
GTAGAATTCAAGCTTGTTGGTGATGATAGTACAATGCCTGGGGGCATTGTCAATGTTCCA
AACCCAAACAACACCAAGTTAGTTCCAAGATCTTGCTCGTTTTGCTGTTCAGGATTATAA
CAATACACAGGTCAATTATATATAATGACTTACTTTTAGTTTCTTAATGATGTACTATAT
AACACTTGCGGCAACTGATGCCGGGAATAAGAAAGAATATGAAGCCAAGATTTGGGTGAA
GGAATGGGAGGACTTCAAGAAAGTTATAGACTTCAAGCTTGTTGGTAATGATAGTGAGAA
AAAACTTGGGGGCTTTACCGAAGTTCCATTCCCAAACAGCCCCGAGTTTCAAGATCTTAC
ACGTTTTGCTGTTCACCAATATAATAAGGACCAGAATGCTCATCTGGAGTTTGTAGAAAA
TTTGAATGTGAAAAAACAAGTTGTTGCTGGAATGTTGTACTACATAACATTTGCGGCAAC
AGATGGTGGAAAGAAAAAAATATATGAAACTAAGATTTGGGTTAAGGTATGGGAGAACTT
CAAGAAAGTTGTTGAATTCAAGCTTGTTGGTGATGATAGTGCAAAGCCTGGGGGAATTAT
CAATGTTCCATTCCCAAACAGCCCCGAATTCCAAGATCTTGCTCGTTTTGCTGTTCAAGA
TTATAATAAGAAAGAGAAAGCTCATTTGGAGTTTGTAGAAAATTTGAATGTTAAGGAACA
AGTTGTTGCTGGAATGATGTACTATATAACACTTGTGGCAACTGATGATGCTGGAAAGGA
GAAAATATATGAAGCTAAAATTTGGGTTAAGGAATGGGAGAACTTCAAGAAAGTCATAGA
ATTCAAGCTTTTTATTGGTGATGATGTCCCAATACTCGGGGGCATTATCAATGTTCAAGG
CATAAACAGCCTTGTGTTCCAAGATCTTGCTCGTTTTGCTGTTCAGGATCATAATAAGAA
AGAGAAGGCTCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAGGAACAAGTTGTTGCGGG
AATGATGTACTATATAACACTTGCGGCAACTGATGCTGGAAAGAAGAAAATATATGAAGC
TAAGATTTGGGTGAAAGAATGGGAGGACTTCAAGAAAGTTGTAGAGTTCAAGCTTGTTGG
TGATGATAGTGCAAAGCTTGGGGGCATTATCATTGTTCCATTCCCAATCAGCTTTGAAAT
CCAAGATCTTGCTCGTTTTGCTGTTCAAGATTATAATAAGAAAGAGAATGCTCATTTGGA
GTTTGTAGAAGTTTTGAATGTGAAAGAACAAGTTGTTGCTGGAATGATGTACTATATAAC
ACTTGTTGCAACTGATGATGGATATAAGAAAATATACAAGACCAAGATTTGGGTGAAGGA
ATGGGAGAATTTCAAGGAAGTTCAGGAATTCAAGCAAATTGTTTATGCCACAAAATGAAA
TAAAACTACTCTTATGCTGGTGTGAAGTAAAGCCAGTTGTTTGGTATAAAGTTACTATTA
TGCTTGTGTGAAATAAAGCCAGTTGTTTGGCATGCAATTACTGTTATGTTTGTGAAAAAT
AAAGTCAGATCTATGTATCTGACAGTATTTAAATGTCTTGTTGTAAGTGTATTTGAATAA
TTTAAAGTTTGTAAGATTAATAAATGTGTGTTTATGTGATGATAAATATTGATGGAGTTG
TCA