Microarray Probes on PGSC0003DMT400015147
Probe ID | Chip | Probe Sequence |
---|
CUST_40075_PI426222305 |
JHI_St_60k_v1 |
AATCTGCCTAGCATTGGATACGATACCACACCAAAGCAAGATGCTCCTATTTGGTACTAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400015147
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400015147 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G20770.1 |
+1 |
2e-54 |
192 |
103/150 (69%) |
Ethylene insensitive 3 family protein | chr3:7260702-7262588 REVERSE LENGTH=628 |
Transcript Sequence (1215 bp)
>PGSC0003DMT400015147 1215 pgsc_dm_v3.4
ATGATGTTTGAGGAAATGGGGTTCTGTGGGGATCTTGATTTCTTTCCTGCTCCGCTGAAG
GAAGTGGAAGTGGAAGTGGCTGCTCCACAGAGTCAGACTGAGCCGGATTCTGTGGTTGAT
GATGATTATAGTGATGAGGAGGAGATTGATGTGGATGAGCTGGAGAGGAGGATGTGGAGG
GACAAGATGAAGTTGAAAAGGCTGAAAGAAATGAGTAAAAGTAAGGAAGGTGTCGATCCT
GCAAAACAACGTCAGTCGCAGGAGCAGGCGAGGAGGAAGAAGATGTCAAGGGCACAGGAT
GGGATCTTGAAGTACATGTTGAAAATGATGGAAGTATGTAAAGCTCAGGGTTTTGTTTAT
GGGATCATTCCCGAAAAAGGCAAGCCGGTTAGTGGGGCATCTGATAATCTTAGGGAGTGG
TGGAAGGATAAAGTGAGTGCTGAGAGATTCAAGGAGACGATGCCTCTTCAGCAACAATCT
CATCCAAACAAGGATGAGCTGATCACCAACTTAGATTTCAGTCTGAAGAGGAAGCAAGCC
AATGAACCGATCATGATGATGGATCAAAAGATCTACACATGTGATTTTCTTCAATGCCCT
CACAATGAACTTCGCCATGGTTTTCAGGACAGATCTTCCAGAGACAATCATCAATTTGCT
TGCATTTACCGAAGCTCTTCCCGGTTTGGAGTTTCAAACTTTCAGATTAATGAAGTCAAG
CCAGTTGTCTTCCCTCAACAATATGTCCAGCCAAAGTCATCTGCTCTGCCTGTTAATCAA
GGTCCACCTTCCTTTGATCTATCTGGTATAGGAGTTCCTGAAGATGGGCAAAGGATGATT
AACGAGCTTATGACAATCTATGATAGTGATGTACAAGGAAGCAAAAGGCAAAATAGGGGG
AATGTTACGTTGACCAAAGAGCAGCCTCATCAACAACCTCGTGTCCACCAGGACAATTAC
CTGCTCAGCCAAGGGATAATGGAGGGAAATATCTTCAAAAACACTAATATTTCCACAACT
CAGTCTATGCTCCCACAAGTCGATCCATTTGATCAATCCAAGGCGTTAAATTCAGCTTTC
AATGCAGGCTCCAACGACAGCTTCCATTTCATGTTTGGGTCTTCGTTCAACATACAGTCT
ACCAATTATAACGGAAATCTGCCTAGCATTGGATACGATACCACACCAAAGCAAGATGCT
CCTATTTGGTACTAG