Microarray Probes on PGSC0003DMT400015084
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_40104_PI426222305 |
JHI_St_60k_v1 |
CTGTCATTTTTGTGATTTTGCTTAGCTTACAGCGTTGAACTGACTATCGTCTCAATTGGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400015084
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400015084 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G27230.1 |
+1 |
1e-63 |
217 |
115/181 (64%) |
transcription factor-related | chr2:11650895-11653840 FORWARD LENGTH=650 |
Transcript Sequence (1150 bp)
>PGSC0003DMT400015084 1150 pgsc_dm_v3.4
ATCTGATTTCAGTGTAGCATTGATGCACTGTTCGAACGCACGATCAAACACATGCTTTTC
TTGCAAAGTGTCACAAAACATGCAGACAAACTAAAACAAACTGGAGAGTCAAAGATCATC
AGTAAGGAAGGAGGATTGCTTTTAAAGGATAATCTTGAAGGTGGAGCAACATGGGCATAT
GAAGTAGGCTCACAGTCTATGGTCTGCCCTATTATAGTTGAGGATCTAAATCAACCGCGT
CAAATGCTTGTGGAGATGCTTTGCGAGGAACGGGGCTTATTTTTGGAAATAGCTGACATT
ATAAGAGGATTGGGCTTGACTATCCTGAAGGGGGTGATGGAAACAAGGAACGACAAAATA
TGGGCACAATTTGCTGTAGAGGCAAACAGAGATGTCACAAGGATGGAGATATTCATCTCA
CTCGTTCGCCTCTTGGAGCAAACAGCAAAAGGTGGAACAGAACCTGTCAATGCTGCTGAT
AACAACACAGCAATGGTGCATTCATTCCACCAAGCAGCGACATTACCTGCAACTGGTAGA
TCATGTAGTTTGCTGTGATCAACACGTTACTACTGCTTCACCTGGTAATGTTAAGAGCAA
GCGACAATTACATGCTTGCCATGACTAACATTTACACCAAAATGATACTTCTGGTGGTTC
TAACGCTACTCCGTAATTTTTGTGCCCCATGAGCCAAGCTGTGTCAGAAATTCAGAATCC
ACTGAAGAGCATAAGCTCTACTTTAGGCCCTCATTCAAGGTGGATAGAATATTCCAATCC
ATCCCTGGTTGTAAACTTGTAAAATATGTAGCAATGCTATAGAATACCTTCCTGTAGGAT
GCTATGATTGCACAAGTTAGTTGTTTTGATTCTTTCCTTAAATGTGCTTGTTTTATGGGG
TTGGTCATAAAAGGGTTGTTTGTTAGTTTAATGTATAGGAAAGTTTGAGATGATATAAGG
GGTGCTGGGAGATTTTATTAGCTGATGTCTTCCTTTATTGCAATTTTTGTGTTTTTGGAC
TTCCAATTCTGTTTATGCTACCCAAATGACTCTTGTAATTTGTAAAGCTGTCCTTTGCCC
TGTACTATTTCTGTCATTTTTGTGATTTTGCTTAGCTTACAGCGTTGAACTGACTATCGT
CTCAATTGGT
