Microarray Probes on PGSC0003DMT400014682
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_6379_PI426222305 |
JHI_St_60k_v1 |
AGAAACAGATTTTGCAGAGCCAACTTGCCTTTGTCGGGACCGGACTTATTCCTATTACTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400014682
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400014682 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G18390.2 |
+2 |
2e-168 |
506 |
298/626 (48%) |
Protein kinase superfamily protein | chr1:6327463-6329935 FORWARD LENGTH=654 |
Transcript Sequence (2416 bp)
>PGSC0003DMT400014682 2416 pgsc_dm_v3.4
CAAGTTTGTCATCTTTTGTTAGTCAAAACTGGATTAACTTTGACACTTGAACAACTCAAT
TGAATCATATATTTTGCCAAACTCTTCTAATACATAGGTTCTCCAACCAACATAGTCTAT
CATTGATGAGTTCTCACAAATGCATGCTCAAAACTTCCCTCTTCCTCTGCTCCATTCCAT
CATCTCCTTCCTATGCTTCTTGATCACGTCCTCGCCATCCTATGGCCAAGAGGATAAACA
GTATTCCACTTGTAATAGCTCCTACACCTGTGGGAATATTCAAAATATCAGCTTCCCTTT
CTGGGGTGGCGATCGACCTCAAGAATGTGGTCTTCCACAATTCAAGCTTACATGTGAAGC
CAATCAGGATCCCCTTATACATATCGATGGTCATAATTTTCGCGTACTTGGCATCAATGG
AGACAATCAAACCATGAGAATTGCACGAAATGATCTTGAGGAAGACATTTGTCCTGATAG
ATTCGGTAACACTAGCTTTAATGATCCCCTATTACGCTATGGTCCTGACTTTGGGATTCT
CATCCTGTTCTATGCTTGTCCTTTTGATATACCTTCTGAATGGAAAAATTTCACCTTTAG
CTGCAATAACACTGGAGAGTCCAGTCATGGTTTCTATCCAGATCAGTCATTTATATCATT
CTGGGGACCGCAGTATGGGAGTTGTGAGCGTAATGTCATAGTTCCTGTGTTGTTAACGGC
ATTTAAGCGGTTCCAAGACCAAGGAAGTACGAAAATATTGGAGCTATTGAAGCAAGGGTT
TGATGTGGTTTACAACAAAAGCCTAGTATGCATGGCTTGTGAGAGATCAGGGGGGTTATG
TTGGTCAGAAACAGATTTTGCAGAGCCAACTTGCCTTTGTCGGGACCGGACTTATTCCTA
TTACTGCGGTTTTGTACAGGAACAAGGTGATAAAAGAGATATCAGAGTGAAGGTTGCCGT
AGGTGTAACTGCAGCTGCATTCACTGCCATTGTGGCATGTGTAATTTTCTTTCTCTATTA
TCGTCGACAGAAGAAAAGTCATGCTGGTTCGTCTTTGATAACCAGAAGTATCCTTTCCTA
TCCCTCCTCAACAATGGACCCTGAAAAATCTTCTCACTATTTGGGAGTTCATGTCTTCGA
CTACAATGAACTGGAAGAAGCCACAAACAGTTTTGATTCCAGCAAAGAGCTAGGAGAAGG
TGGATTTGGCACAGTATATAAAGGTAAACTTCGAGATGGGCGTGTTGTTGCTGTAAAGCG
TTTATATGAGAACAACTACAAGAGGGTTGAGCAATTCCGAAATGAAATTGAAATCCTCAC
TCGTTTGCGCCATCGAAATCTAGTTACCCTTTACGGATGCACATCTCGCCATGGCCGTGA
GCTTCTTCTTGTGTATGAATATATTTCCAATGGTACTGTTGCTGATCATCTTCATGGGGA
ATTCTCAAAGCCTGGATCGCTTTCATGGAATACACGAATGAGCATTTCCATAGAAACGGC
AAGCGCGCTAGCCTTTCTCCATAATTCAGAGGTCATTCACCGAGATGTAAAAACTAACAA
TATCCTCCTAGACAGTAATTTCTGCGTCAAAGTAGCTGATTTTGGATTGTCTCGGCTTTT
CCCTACTGATGTTACACATGTCTCAACAGCTCCACAGGGTACCCCTGGATATGTTGATCC
CCAGTATCACGAATGCTATCAACTCACCAGTAAAAGTGATGTTTATAGTTTCGGGGTGGT
ATTAATCGAGCTTATATCCTCTCTGCCAGCTGTTGATATCTGTAGGCATCGACAGGAAAT
AAATCTATCAAATATGGCAATTAACAAGATTCAGAGCAACGCATTACATGAGCTGGTTGA
TTCAAATCTTGGTTTTGACTCCAATGACTTGGTAAAGTTGATGATCACTGCCGTGGCAGA
GTTGGCTTTCCAGTGTCTTCAGAACGACAGGGATTTGAGACCATCCATGCCAGAGGTTTT
GGAAGCTCTACTGGGAATTCAGAGTATGGATAAAACAGCAACAGAAATAGGGAAGCCAAG
TCCCGGTGATGATGCTGGATTGTTGAAGAATCACACATTATCTCTCTCACCCGATTCAGT
TATTTCAAAATGGACTAGCAGTAGCAGTTCAACAACACATGCTTCCAGTATTGGCTAAGT
TTATGCCCTTAGTTTGTCTAGTTTGTGGTTTTCTTGATAGTGATTCTTCAGCCACCTGCT
CTATTGGTCGCGGAAGGTGAATTTTAGTGTCTTTCCTTTGAGTACTTTGGACCTTTTTCT
ATCTTAAAGAGGTTGTACATATCTCGTATGCAGCAATTTAAATTTATCAATACTAATTCA
ATTCATTTCTTAAATTCTTTAGTTAAATTGTGTAGATACTTGTTCAATTGATCATCTTTG
TCATAACAGATTTTGA
