Microarray Probes on PGSC0003DMT400014624
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_6733_PI426222305 |
JHI_St_60k_v1 |
CAATTGCAGATGATAAGCGCAAGTGGGTTTACTCTACTCACGTCGTTTCCCCAAATCAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400014624
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400014624 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G73875.1 |
+2 |
1e-112 |
243 |
120/208 (58%) |
DNAse I-like superfamily protein | chr1:27781112-27784571 FORWARD LENGTH=454 |
Transcript Sequence (1875 bp)
>PGSC0003DMT400014624 1875 pgsc_dm_v3.4
TATTTATGTCTTTTTAGTTTCACCCCTATTCGTCCTATAAAAGGTTAAACACGCGCCGCC
CAAATTCAAATCTCCCGGCAACATGGGCCGAACCGGCGACGGCAGAGATCCACCGGCGGA
ACAGCCTTCTCGGTTTTCAGCTTCAATGAAAAGTAGAATTAGTCAACATGATATTGGTAA
ACACCGTAGCAAGAAGAAGCAAAGAGTATCAATAAGTAAAACTGAAACGGAAACTGCAAC
CCTAACCCTAAATCATACTTCCACTTCTTATACACATTCATATGCAAATTCGTACTCATA
CTCGTACAGTAGGGGCAAAGAAAAACGGCATAAAGGAAAAGCAAAGAGGGCAATTGCAGA
TGATAAGCGCAAGTGGGTTTACTCTACTCACGTCGTTTCCCCAAATCAAGATAGAGTTGT
TTTTATGTCGTATAATATACTAGGGGTAAAAAATGCTGCAGCACATGAGGACCTGTACCG
CAATGTCTCTCCAAAATATTTGGATTGGGACTACCGGAAGAAGCTTATATGCAAAGAAAT
TAGGGACTATAATCCGGGTATAATGTGTTTCCAGGAGGTTGACCGTTTTGATGATTTGGA
TTATCTCCTCCAGAAAGAGGGCTTCAAAGGGGTTTATCAGGCTCGTACAGGTGATGCAAG
TGATGGTTGTGCAATATTTTGGAACAGCAAACTATTTGACATTCTGCATGAGGAGAGCAT
AGAATTCCAGAATTTTAATCTTCGCAATAATGTTTGCCAACTTTGTGCTTTCAAGATGAA
TGTGAAAAGCTCAAGCAAGGATATGAGTGCTTCAAATTCGGAGAGTGTAACCTCGCCAAG
CTTTTTGGTTGGCAATATTCACGTACTCTACAACCCCAATCGTGGAGACATCAAGTTGGG
ACAGGTTAGACTCTTTCTTGAGAGTGCCCAGAGGCTATCTCATGAATGGGGTGATATACC
AGTCGTGCTTGCTGGAGATCTAAATAGTATGCCTCAGGTAATCTACCTACTCTGGAAAGT
TGGAAATGTTATATTTTGAAGCTTGCAGATCTAATTTTCTATTTGTTGCTGCTTAGAGTG
CAATGTATCAGTTTTTGACTTCAAATAAGTTGGACATCCAAATGCATGACCGAAAGCAAA
TCTCTGGCCAAATTTATCCATTGCAAAATAGAAGCTTCAACCCGAGATTAAGTTATAGAT
GGAGTAATGAAGAGCTAATGCTTGCTACCGGAACAGGAGCTAGTCACTTGATACATCAGT
TACAACTGCGCAGTGCCTATGCTGGAGCTCCTGGAAGCTCTAGAACCAGGGAAAACTCTG
GAGAACCCTTGGCAACATCATATCATTCCAAGTTTATGGGAACTGTCGACTATATATGGC
ACACAACAGAGTTTGTTCCAGTACGAGTTCTTGATACCTTACCTGTTGATATTTTAAGGA
GAACAAGAGGGCTTCCTAGTGAGAAATGGGGAAGTGATCATCTTTCTCTAGTGTGTGAAC
TGGCTTTCACTGATGAAGGGAGTGAGACTTGACTATTCCTTTCGATTTAAGTTAAAAGTT
GAAATACAATTTGGAAGGTCCATCATGCGTGACATACTGCTTCATTGGATAATTCATCGG
TGCATAGAAGAATCTCGCGCAAACAAAAGGAACATAAGTGTACAAGGAGGAACATGGGAA
GGAACGGAAACTGGCGAAGATACATTAAAGGGATTGAAAAGACTATCCATTGTCTGTCCT
CTTCATCTTAGTGATTTATTAATTATAAAATAAATGTTTTATTAAATATAATAAAACCAT
CTGAATTATAGTTTTGCTGGATTCATCTGAAGAAAACTGTTTCTGTTTGTTTCCAACAAA
AGAATGCACTATTCA
