Microarray Probes on PGSC0003DMT400014243
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_19360_PI426222305 |
JHI_St_60k_v1 |
TTTTCCTTAGCTTTTGTGGGGGATAGAAACATAGGCCTCCACTACGTGCTCTCTGGTTTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400014243
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400014243 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G62980.1 |
+3 |
4e-13 |
71 |
31/56 (55%) |
F-box/RNI-like superfamily protein | chr3:23273479-23276181 REVERSE LENGTH=594 |
Transcript Sequence (1205 bp)
>PGSC0003DMT400014243 1205 pgsc_dm_v3.4
GAAGCAACACTCTTTCTCCCTCTTTCAGTGATGCAAATCACAAAGTTTGAAAGAGATGTC
AAAAAGTTTAATGGCTAATAAGATAGGCCCAGGCAACACACCAGAATAGAACAAACACGC
ACCAGAAATAAGGATCAACACAGATTCTCTATTTGTATGAATGTCATCTAGATTGCTCCT
AATAAAATGTCAAAAGCCTAAGTCATTTTTTTGTGTGTTCCGTTCACCCATTTTAGTATT
TGCAAAGCTTGAAATTTGAGGTAGAAAATTTAAGAAGGATGAACAATGAAATTGATCAAA
TGATTAGAATTTCTTAGACACTTGAAGAAGAGTGTATTTGTTTTATAAGAGTATTTACGG
GAGCAAATTATTTTGTTAAATTAATTAAGCAAAAATATCTTAAAAGGGAGTACGAAGCTG
AAATTCACACTCTAATGACTACCATGGAAATTGCAATGGAGAGAAGAGTAAAGCGGAAGG
TGTGAGAGTCAATATGAATTGGGATATTTCCTTCTCTTTTTTTGACATAAAATACGTGCT
ACACGTGTACAGAAAGTAGTACATATTACACACTTAAGAAAAAGTAAAAGTACACATTAC
ACACATTAACCCTTGATAACTTCTGATCCATAAATTACTGAACAACAAGGCATCTAAAGA
TATCCTACCGTCTCCAGCTTTGCAACATTGACCAACAGAGACTCGTTGCTGAAGGGGCTG
TCTCTTTTCTCCATATTACAAAGGCTTACACAACTGGAGGAATACGTAGTGGAGGCGTGA
ACGGGGAAGTCGTCACAATTGCCTGCAATGGTGAATGATGGCCCCAAAACCAGTGTCAAG
CAGTCCAAGGGTTAGGTAATCAGGGTTGTCCATTCAGATGCAAAGATCAAAGATTTTTTG
CACCTAAGGACACAAGTACTCAGAAAAGGGTAATCTACAAAGAAAAATGCAAAAATTAAC
AAGAGATATTCTCATTTTTTTTACAAATGCAGTTACTGTATTGAGTCATTTGCAATACAT
GCACTTGATGCTGGTTTTGGGGCCATTTGCAACAATGCAAGCAATTGCAGCGATTCTCTC
TTTCTGGCCTCATTGCAGATTATGTTTTCAAGTACATCGGCGTCCATGCTAACAAGTTAG
AGATGTTTTCCTTAGCTTTTGTGGGGGATAGAAACATAGGCCTCCACTACGTGCTCTCTG
GTTTA
