Microarray Probes on PGSC0003DMT400013968
Probe ID | Chip | Probe Sequence |
---|
CUST_50927_PI426222305 |
JHI_St_60k_v1 |
TTTAAACAAAAGACAACGCTTGAACCTAGCAAGAAGCTTGAACTGGCCAGAGATCTCGGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400013968
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400013968 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G61890.1 |
+3 |
1e-29 |
117 |
92/230 (40%) |
homeobox 12 | chr3:22914346-22915239 REVERSE LENGTH=235 |
Transcript Sequence (1613 bp)
>PGSC0003DMT400013968 1613 pgsc_dm_v3.4
GTTTCAAATAAATTAATAATACTCTTATTTCTTATCCCCCCATCAATAAAGTTATGGAAG
TAGCAGAAGATAGCAGTCCAGTTGAGTGTTCAAAGAAGAAGAGTCATGAAGATGGTAAAA
GGTTTAGTGATGAACAAGTGAAGGTACTTGAGTCCATGTTTAAACAAAAGACAACGCTTG
AACCTAGCAAGAAGCTTGAACTGGCCAGAGATCTCGGGCTGCAACCGCGGCAAGTTGCGA
TTTGGTTCCAGAACAGAAGGGCAAGATGGAAAACAAAGCAACTAGAGCATGAATATAGAC
GACTCAAAGATGAATTCGACAATTTAGCTATTAAGTTTGAATCGTTGAAGAAAGAAAAGG
AATCTTTGCTCAAGCAGTTACAGGAACTAAGTGATCAGATGGAAAACAACCATGCTGGTT
GCAGCAGAAGCCAAGATTCAATTGACAGTGAAATCTATACAAGCTCAGAAAATATAGAAG
CAGAAGTAGATGTGAAGGACAATATCCCAGGTTGCATAAATACGAGTTTAGACCACGAGA
GGATTAAGGGAGCAGATAGTGACATAGAAGGAACACTATTTGAACACTTGAGGTGGAAGG
AGGAAGAAGAGTTTTGGAACATGGAGGAATTAGGAGACAGTTTCTTAGGATCACCTGAGC
ACTGGTATGCTGTAGGCCCAGGTTATTCCTTCGACCTGTCATGTGAAAATTCTAAGTGGT
GGGAATTTTGAACTCAACATATACATCAATACTTTCAAAGGAGTAAACAGGTGATCAAAC
TTCGATCAACAAAAAAGTTTATGTTTTCTTACTCACATTGATGGAGCCAAGGTTGTGTGC
ACAGAATAGGAGGGACTTCATTCCCAGTTGATCTTTCTCCCATTGTGCCGAGAATCTGGA
AGGAGCTTGCCAAAATGATTTGCAAGGAAAACTAGTGGCATAACATGAGAAAGAGATGCA
CTAGCCTTTCTCCCAAAATGTCACAGTGATGTTTCTTTCTTTTGATAATGGATATATAGC
TTGTAATTTAGTTCACAAGAAAGAAAACAGTGTATATAGGGCTTCTATGCGTAATCACAA
TAAAATAAAATGGATGTGCCATAATCAAAAGTCAGGTCTTAATTTCTAGTTATGTGAATA
GAAAAACTTTTAGTAGGTTAGCATGTAAAAGTGTGTTAATGTTTTCCCTTAACGGGTAGT
TTCATGCATATTGCAGCCGCTAATGACGAACTTTAAAGCATAGGGCTTGATCCTAACTTG
TTGTGCACTTGACAAAACTCAGCTGAGTAGAGCAAATGGAAGTACTAACATTTTAGAACT
TATGTTATATAGTGAAACAAACATCGAAGGATGGAACGAAGTCAAACAAGCAAATAAAAT
ACAAAAGAGTGCCAAATGATAGAGTGTCTTGACTGCAAAAATGCAAACACCTGTTTACTT
GATCTTCTTCTTTGGCCTCAACTGAAATAAAAGTAAGAAACAGAAGAATCATTTAGTATG
GAGTCTAGTAATGCACAACAGTTCACAAAATTGACCAAGAAGATACCTGGTTGCTATGGC
CACACTTCTTTTTCCTGCAATTGACAGCACGAGGGTGCAAACGTGCATAGCAC