Microarray Probes on PGSC0003DMT400013822
Probe ID | Chip | Probe Sequence |
---|
CUST_17243_PI426222305 |
JHI_St_60k_v1 |
TGACTATCATTTTCCTGCTCCTTGGGTAGGACCATTGAAGAATGCAATTGATTGGGCCTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400013822
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400013822 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G27890.1 |
+3 |
9e-34 |
124 |
67/88 (76%) |
NADPH:quinone oxidoreductase | chr3:10350807-10351938 REVERSE LENGTH=196 |
Transcript Sequence (846 bp)
>PGSC0003DMT400013822 846 pgsc_dm_v3.4
TGTTACTACAATGGGTGTGACCGCTTGAGTTGAGGTAATCATAGTCTGTACATCTTAATA
CAAACAGAGAATTTGGTCCCCTAGTTTAAATCCAAACCATTTTAATCTGAAAGTATCGTA
GATTAGGCTGTGGATATGCAAGTAGCTATAGGTTGGTAAACTAGTGTTGATGGATTTTTA
CTTCTTGTGATGACACTCTTGGTACTGATGACTATCATTTTCCTGCTCCTTGGGTAGGAC
CATTGAAGAATGCAATTGATTGGGCCTCCCGACCTCCAAATGTTTGGGCTGATAAAGCAG
CAGCAATGGTGAGCGCTGGAGGTGGCTTTGGTGGAGGACGGTCACAATATCACCTCCGAC
AGATAGGAGTCTTCCTTGATCTTCATTTCATTAACAAACCTGAATTTTTCCTGAACGCGT
TCCAGCAACCACCAAAGTTTGACAGTGATGGTGTGCTGACAGATGAAGAGACCAAGCAGA
GACTCAGAGCAGTTCTTTTGGCTTTACAAGCACTTGCCTTGAAACTCAAAGGCAAGTGTG
AATAGTTTCTACCAGTAAATGTGGTCCATTTCTTCATCCAATGTGGATGGTAAAGAATTG
ACATTTCCACCTCACATGGGAAAAAATATCTACTTATAGACTTTTGAAACATCTGTTCAG
TTGATTGAGCGTGTTAGCAGGATTTAAATTGTATTCAAAGTTTCATGGTGATTGATGTAA
TGGCTCCAACATGTTTCTGTCTTTCGTTTTCTGTTCTGTCAGCATTACAAAATATCATCA
ATACATATACTTCGAATAGACTAGTGGTCCAACATGTGTTCATACCCAAGTTCAGCTCAC
CCCTTG