Microarray Probes on PGSC0003DMT400013810
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_17225_PI426222305 |
JHI_St_60k_v1 |
CTGTTGTATACCATAGGAGTTGGAAAGATTCGATTACGAAGGGAAAAAGGAATTATAAGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400013810
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400013810 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G56710.1 |
+3 |
4e-08 |
52 |
25/49 (51%) |
sigma factor binding protein 1 | chr3:21007053-21007508 REVERSE LENGTH=151 |
Transcript Sequence (1078 bp)
>PGSC0003DMT400013810 1078 pgsc_dm_v3.4
TTTATACCTCTCAAACAAATTCCATTTCTCATTCACTTTATCATCGTACTATTAACTACT
TTCTAGTTGAAATCTAAGGCTCTGCTGATCAAGTTAGTTATCGTAAACTAATTTGAGATT
GAGGCGTAGTTATGATAATGAACAACAAGAAACAAAAGAGAAAAAACGATCATAGATCGA
AGAAGCCAGATGTCAAAGTTGTGTACATTTCTACTCCGATGAAAGTTAAGACAAGTGCCT
CGAGATTTAGGTCACTTGTACAAGAACTCACGGGACGGGACTCGGATATAGAGAGAATTA
TGGAGACTAATGGGTCGATAACGGAGTATGAAGATATTCATCGTGAACGCGATGATTTTA
ATGAACTTCCAACAAAGTCGTCATCACTATCACCATCACCATCATCGTCATCGTCTTTGC
TGCTAGCAAAATCATCTAATTCATCTCCTATGAGTTCAGAATCTAATAATTATTTTATGG
AGCCTAATTTTGATGATTTATTTAACAGCCAAATGGAAGAGCAATTCCTTGCTTTATTGG
CTTCATCAAATTATAATTTGCCACCTAGTAGTAGTGATTATTCAGCTGAGATTGATGTAC
TTGGAAGCTATGATGCACTACTTTAGATTTATTTTGTTTTATTTTATTTTTGGATAATTA
GGTGGGTAGATACGATCGACTTAATTAAGAGGTGTATGTATGTATATATGTATGTATTTT
TTTATATGCTAAGCGGATATTGTTTAGATAGTATTGTATCATCAGTATAACTTATATACT
ACTGTTGTATACCATAGGAGTTGGAAAGATTCGATTACGAAGGGAAAAAGGAATTATAAG
TAATAAATATTGGTAGTAGAAAAACTTTATATATATTTCGGAAAAGGGTCAAAATTGCCT
CTGAACTATGTGAAATAGACCACTTATACCCTCCGTTACATTTTGAGCTCAAAAATACCC
TCACTCTTATCTCTAGAGACCACAAATACCCCTCAAAAGTTAACAACCCAAATTTTTAAT
GACATGGCAAGCCATGTGTGACTGATCCTTCCACCTAAGCTGCCAACTAGGATTACCA
