Microarray Probes on PGSC0003DMT400013634
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_49592_PI426222305 |
JHI_St_60k_v1 |
TTCAAGCCATGCTTTTGTCGTTCAAGATGCACTTTTCGTCAATTAACCAGGATTGAGGCG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400013634
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400013634 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G63220.2 |
+2 |
8e-171 |
494 |
231/349 (66%) |
Galactose oxidase/kelch repeat superfamily protein | chr3:23357540-23358598 REVERSE LENGTH=352 |
Transcript Sequence (1828 bp)
>PGSC0003DMT400013634 1828 pgsc_dm_v3.4
CCGTCTTTTTCAGCACAATATCTGATTTTTATTTGGGGCTTTTCTCTTGAGTTATCTTCT
TTGCTTAGCAAGGTTGACGTCAACAAATAGTTGTACACCAACATTATATTTGTTGATAAA
GATAGGTGCAAGGTTGGTGGTTATGACTGCACTCATCGAAGGTCTTCCTGATGCTGTTGC
CATTAGGTGCCTTGCACGGGTTCCATTCTACCTTCATCCAAAGTTAGAGCTTGTTTCCCA
TTCCTGGAGAGCTGCTATTCAAAGTGCTGAACTATTTAAAGCTAGACAGGAGGTCAACTC
ATCTGAAGAATTTTTATGTGTATCCGCATTTGAACCTGAAAACTTATGGGAGCTCTATGA
TCCTACACATGACCTTTGGATTACTCTCCCGATTCTCCCCTCCAACATCAGTCATTTTGC
TCGCTTCAGTGTTGTTTCTACTGCTGGGAAGCTGTTTGTTTTAGGTGGTGGCAGTGATGC
TGTGGATCCATTGACAGGTGACCAAGATGGAATTTTTGCAACTGACAAGGTCTGGTCATA
TGATCCTGCAACCCGAGCATGGAATCCGCGTGCATCTATGCTTGTTCCTCGTGCCATGTT
TGCTTGTTGCGTGTTGGATGGGAAGATAGTCGCTGCAGGGGGTTTTACTAACCGCAGAAA
ATCAATATGCAATGCGGAAATCTATGATCCTGAGACGGATGTCTGGGTACAATTACCTGA
TCTCCATCATGCGCACAATTCTGCTTGCTCGGGAGTAGTTTTTGGTGGTAAAGTTCATGT
CTTGCATAAAGGTTTGTCAACTATTCAGGTTTTAGAAAATTTCAAGCAGGGTTGGATTGC
TCACGAGTATTCTTGGCTCCAGGGCCCGATGACTGTCGTTAGGGAAAATCTTTATGTTAT
GAGCAATTGGTTCATTTATAAGCAAGAAGGAGAATTAAGAAGAATGATAGTTTCAGCATC
TGATTTTCGTAGGAGAATTGGGTATGCTATGATAGGGTTGGGAGATGATATTTATATAGT
TGGAGGGGTTAATGGACCGGATTACTGGAATTGTAGCGTCAAAGTGCTGTCTGATGTTGA
TGTCTTGACCCTTGGAAGTGAGAGGCCAGCGTGGCGTAAGGTTGCTCCATTGACAAGGTG
CAAAGGGACAATCCTTGGCTGCACACAGCTGAGAATTTAGGACATGCATAAATGGGGATG
AAGTTTATTTCAGTGTTATCGAAAAAATGCTACAACGAACATTTGGCACTAAAGGGGCTG
CTAGGGATAGCGTGAAGTAGACAAGTGAACAGGAAAAAAGCAAATTGAGATTACTAATGG
TGGATGAAGTTTGAGGGTAAACATGTTCCATGCCTTGCCCTTGTCTCCTTTGTCGTAGAT
TGAAAATGATGGAAATCCTATCTAACATGACTTCTATGAGTTGTCTTAGCAGTGATCGAC
TTTATTTTATTAGTTGTCTAAAAGCTACTGTAAATGAAATCCCGCGCCAGAAACATGGAA
GCAACAAGATGTTCAGCTTTCTTGCAGCTTCCTTACTGAGTTCTTGAGTGGAATGAAGTT
CACCCGGACTTTGAGAACTGGAGATTTTGACATGATAAAATACATGTATTTGCATTAAGG
AGCACTAGTATTTTGTTTTCTTAGTGTTTGTAATTTGAGATGAATTTAAATAGAGTAATA
GGGTCAGATTTATAGTTGACCTCAACTTGTTTGAGACTGTTGCGTTATTGTAGTTTAAGA
TGGATTAACTTGTTGCTTACTTGGTTACTTCAAGCCATGCTTTTGTCGTTCAAGATGCAC
TTTTCGTCAATTAACCAGGATTGAGGCG
