Microarray Probes on PGSC0003DMT400013513
Probe ID | Chip | Probe Sequence |
---|
CUST_32900_PI426222305 |
JHI_St_60k_v1 |
CAGCCAGGCCATATGACGAAATTTTCCTGCAAGATTAAAAATTTACAGTACCATTTTTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400013513
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400013513 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT4G25910.1 |
+3 |
2e-65 |
208 |
136/187 (73%) |
NFU domain protein 3 | chr4:13164128-13165094 FORWARD LENGTH=236 |
Transcript Sequence (927 bp)
>PGSC0003DMT400013513 927 pgsc_dm_v3.4
ACTGCTTCGATTGCACTGTTAAATTGTGTACATCTATCTGGAGAAAATTTCTTCATTTTC
CATGACGTAATGTTGCTGCCATTACCTCTTTATAGAACTGTGTGTCACAAGGCAGCCCAT
TTTCTTCAAAGCAAAGTTCTTTTCTAAGAGGTCAATATCATGTTAGACACTTCCTTGGGC
TCGGTCGAACTGGACAAAGAAGAAAAAATGCAGGTGCTGTGGTATCACCAAGTTGTGTCC
TTCCACTTACTGAGGAAAACGTCGAGAAGGTTCTAGAGCAAGTCAGGCCAGGCCTAATGG
CTGATGGAGGAAATGTGGTACTACATGAGATCGATGGCCTAGTTGTAATTCTTAAGCTTC
AAGGAGCATGTGGATCTTGTCCAAGTTCAACAATGACACTTAAAATGGGAATTGAAACTC
GTCTTCGGGACAAAATCCCTGAAATAATGGCAGTTGAACAGATTCTTGACTCTGAAACTG
GCCTTGAGTTAAATGAGGAAAATATTGAAAAGCTTCTTGGAGAGATTAGACCATACTTGG
TAGGCGCCGGTGGTGGAGAATTGGAGCTTGTACAGATTAACGACTACATTGTTAAGGTTA
GGCTAAGTGGACCGGCTGCTTCTGTGATGACAGTTCGTGTAGCTCTTACTCAAAAATTGA
GAGATGCAATACCAGCTATTGCTGCTGTTCAGTTGACAGATTGAAGAAAATGCTCAGCCA
GGCCATATGACGAAATTTTCCTGCAAGATTAAAAATTTACAGTACCATTTTTGTTATACA
ACATGTAGCATTCTTTATCCCTTCACTAGTGTACTCATAAATCAACATCTTTATATTGTC
AATATTAGCAACTTCAATAGCAAAATGATATATTTTGCAACTAAACTTGTTAATGTTGAA
GAGTGGTTTAACTTAACCAATTAAAAG