Microarray Probes on PGSC0003DMT400013202
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_7756_PI426222305 |
JHI_St_60k_v1 |
GACCTTATGCCAATATAGCATTTGTTAGCAGATTTGTTGAGAATATTACCCCGTTAAAGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400013202
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400013202 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G10240.1 |
+1 |
5e-15 |
76 |
63/216 (29%) |
F-box and associated interaction domains-containing protein | chr3:3166698-3167867 FORWARD LENGTH=389 |
Transcript Sequence (1119 bp)
>PGSC0003DMT400013202 1119 pgsc_dm_v3.4
ATGGAGACTCATTATCAACATTTGTCTCATGACATAGTATCGGAGATTCTAACATATCTT
CCAGCTAAGTCTTTCATGCGATTCAAGTGTATTTCTAAAGCTTGGAATACTACTATGCAA
GATCCCAATATTATCCGGTTACACTATGCTCGTTCTCAAGTCTGCCCTTCAGCCTCCCGA
CTTTTGTTTCAACTCAATACACGTCCTAAAAGGCATTGGGGTAGAGGTCATGAATCGATA
GATTTATGGTTACAACTTGATTATTTTTTCTACGATGAAGATATGGCTATTTGTTCGAAT
CATTGCAATGGATTTGTTTGTTTGTATAGCTATAAAGATAGTCAGTTTTATTTATTCAAT
GTCACCACAAGGGAGATAAAAGTTTTCCCAACCTACGTGAATGAAGAAATAAGAATTACA
CCAAACTTCAATTGTCCATTTGATAAATTGGTTCTAGGGTTTGATCAGGTGACGGAAAAC
TTCAAATTGCTACTTTTGTTTACTCGTGATTACACGTTCGAGGCCAAAATTCTAACGCTA
GGAGTAACCAACTCGACTTGGAGAAAAATTGATTTGTTTAAATATAGAAGTATCTCATGT
GATGATTTTGGTGATGAATGCATTTACCTTAATGGAGTTGTTTATTTGGGTTGGCCGGCG
CATTATATGGTTTATTTCAACTTTGCAGATGAGGAATTTGGTTATGTTTTACCTCCACCA
CAAACTTATTTCAGTCATTTAAGTATCATGGATACTGCAATTTGGGGAAAATTGGCTATC
TATTGCATCAAGAAGAACTCTGATCGACAATATTTTGGGTACGTGGATATTAAAAAGGAG
GTATATATTACTCTTGAGAAAGTTTATATTAGTAGAGAAAACTTGCCTGTGCATATTGAT
GTCATTGCTGCATTGCTTGGAACAGAAAAGATGTATGACAAGACAAAGAAGGCGTATGTT
TTTGCAACAACGAGTGTAGTGGGTGCTCCTGCTTCAATGCCGGCTAATTGCATAAGATTT
ACTGAGCATAGCAACATAACCAAGAGACCTTATGCCAATATAGCATTTGTTAGCAGATTT
GTTGAGAATATTACCCCGTTAAAGTATTTACTAGTTTGA
