Microarray Probes on PGSC0003DMT400012547
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_33909_PI426222305 |
JHI_St_60k_v1 |
GGCGAAGGTAAAACTAACCTAACTTGATGAATGAGAGATTTTTACTGATACGTGATGATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400012547
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400012547 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G53910.1 |
+3 |
2e-79 |
254 |
171/407 (42%) |
related to AP2 12 | chr1:20135242-20136581 FORWARD LENGTH=358 |
Transcript Sequence (1480 bp)
>PGSC0003DMT400012547 1480 pgsc_dm_v3.4
AGTACATTCTCTCTTCAAATTGAACTTTTTCTCCATTAAAAATTTCTCTGCAATTTTTTT
TTTTTTTTTACAGTTTTGAGAAGAAAGCAAAAGCTATGTGTGGTGGTGCAATTATCTCCG
ATTTGGTACCTCCTAGCCGGATTTCTCGCCGGTTAACGGCCGACTTTCTATGGGGTGCAT
CCGATCTGAACAACAAGAAGAAAAACCCTAGTAATTACCACTCAAAGCCCTTGAGGTCTA
AGTTTATTGACCTTGAAGATGAATTTGAAGCTGACTTTCAGCACTTCAAGGATTACTCTG
ATGATGATGAGGATGTCAAGGCCTTTGGCTCCAAATCTGTGAGATCTGTTGATTCAAACT
GTGATGCTGACAGATCCTCCAAGAGAAAGAGGAAGAATCAGTACCGGGGTATCAGACAGC
GTCCTTGGGGTAAGTGGGCAGCTGAAATACGTGATCCAAGGAAAGGGATTCGAGTCTGGC
TTGGAACTTTCAATTCTGCTGAAGAAGCAGCCAGAGCTTATGATGTTGAGGCGCGAAGGA
TCAGAGGCAAGAAAGCTAAGGTGAACTTTCCTGATGAAGCTCCAGTGTCTGTTTCTAGAC
GTGTTGTTAAGCAAAATCCCCAGGAGGCACTTCGTGAGGAAACCCTGAACACAGTTCAGC
CTGACATGACTTATATTAATAACCTGGATGGTGGATCCGATGAATCGTTCAGCTTTTTCG
AAGAGAAACCAGCAACAAAGCAGTACGGCTATGAGAATGTGTGTTTTACTGCTGGAGATA
TGGGACTGGGTTCAGTTTCCCCTTCAGCTGGTACAAATGTTTACTTCAGCTCTGATGAAG
GAAGTAACACTTTTGACTGCTCTGATTTCGGTTGGGGTGAACCGTGTGCAAGGACTCCAG
AGATCTCATCTGTTCTGTCAGAAGTTCTCGAAACCAATGAGACTCATTTTGATGAAGATG
CCAGACCAGAGAAAAAACTGAAGTCCTGTTCCAGCACTTCATTGACAGATGACGGTAACA
CTGTGAACACGCTATCTGAAGAGTTATCGGCTTTTGAATCCCAGATGAAGTTCTTGCAGA
TCCCATATCTTGAGGGAAATGGGGATGCATCAGTTGATGCCTTCCTCAATACAAGTGCAA
TTCAGGATGGTGGAAACGCCATGGACCTCTGGTTCTTCGATGATGTACCTTCTTTAATGG
GAGGCGCCTACTAAGCTGCATAAACGTCTTCCCTTGCTAAGTTTTGTAAATAACGCTTCA
TTTGAGTGAAGTTTGCGTTTGCGTTTACGTTATCTCCAAACCAAGACTAATATGTATTGT
ATTAATTTATTCAAAACTTTACTCGTTTGATATATGTAAGTATGTATCCTTGCTTTCATT
AGTCGATGGTTTACAGTCACAAATGCGTTGGCGAAGGTAAAACTAACCTAACTTGATGAA
TGAGAGATTTTTACTGATACGTGATGATTAACTAAATTGT
